| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 89765 |
| Family | GH127 |
| Protein Properties | Length: 798 Molecular Weight: 89574.2 Isoelectric Point: 5.5559 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH127 | 248 | 568 | 1.5e-21 |
| QQDTLSGFHANTHIPILIGAQKRYELTGDQVSKELVTFFMDAVNSSHRFVTGGTSDNEFWKDPNRMASSLGKDVEESCSSYNMLKIARNLFRWTKDASYM DYYERLILNGVLTIQRGEPGVMIYMLPMGPGMAKTSSTMGWGDPFDSFWCCYGTGIESFSKFGDSIYFEDYGVRDENPGAQRPIPALYVAQFVPSTLEWD SAGLILKQTVKPLTSFDPVMEVTIHLHENPKATIEETSPYHKLINTLYVRIPSWVASGYEAYFNDEPQDITPGSFLAIQREWKAGDKLTFKFPAEVRLEH IQDDREEHQSLNGIMFGPFVL | |||
| Full Sequence |
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| Protein Sequence Length: 798 Download |
| MSDPPPAIVP ASFAAAASKI HLLEGSSLHK VRIDADSLQG KGQQTNLEYL LMLDVDSLAY 60 SFRNNSGLPT KGVPYGGWEA PDQELRGHFV GHYLSATAKM WASTHNEELK RRMDHLVDIL 120 DECQQKIGTG YLSAFPLNLF TRFETYRPVW APYYTIHKIM AGLLDQYTEA GNMKALRMVI 180 WMAQYFSKRV ENYIEKYSIQ AHFQALNEET GGMNDVLYDL YKITGDPQHL KLAHLFDKPC 240 FLGPLALQQD TLSGFHANTH IPILIGAQKR YELTGDQVSK ELVTFFMDAV NSSHRFVTGG 300 TSDNEFWKDP NRMASSLGKD VEESCSSYNM LKIARNLFRW TKDASYMDYY ERLILNGVLT 360 IQRGEPGVMI YMLPMGPGMA KTSSTMGWGD PFDSFWCCYG TGIESFSKFG DSIYFEDYGV 420 RDENPGAQRP IPALYVAQFV PSTLEWDSAG LILKQTVKPL TSFDPVMEVT IHLHENPKAT 480 IEETSPYHKL INTLYVRIPS WVASGYEAYF NDEPQDITPG SFLAIQREWK AGDKLTFKFP 540 AEVRLEHIQD DREEHQSLNG IMFGPFVLAG LSHGEFDLGP VDTSSPSDWI TPVNPSDNDL 600 LYTFRMGDYQ LGHKHRTVTL DSASTNGTDW DFEATFKVIS SSSPSLAASK HSGLVGRVVS 660 LELLDQPGRI IAHSGINKNL VVVDTSQFAD STNYLSQANL GFKVVPGLAS DRLVSFESQD 720 LPGCYIYVDD WRVPAQLKCR SKENDGFDAK ASFKASQGLR SYHPLSFVAT SQGLRNFLLF 780 PQLAYRDEHY AIYFDMV* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05270 | AbfB | 5.0e-6 | 667 | 759 | 96 | + Alpha-L-arabinofuranosidase B (ABFB). This family consists of several fungal alpha-L-arabinofuranosidase B proteins. L-Arabinose is a constituent of plant-cell-wall poly-saccharides. It is found in a polymeric form in L-arabinan, in which the backbone is formed by 1,5-a- linked l-arabinose residues that can be branched via 1,2-a- and 1,3-a-linked l-arabinofuranose side chains. AbfB hydrolyses 1,5-a, 1,3-a and 1,2-a linkages in both oligosaccharides and polysaccharides, which contain terminal non-reducing l-arabinofuranoses in side chains. | ||
| COG3533 | COG3533 | 9.0e-71 | 28 | 576 | 562 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 4.0e-153 | 31 | 569 | 548 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_196799.1 | 0 | 13 | 796 | 94 | 859 | catalytic [Arabidopsis thaliana] |
| RefSeq | XP_002283032.1 | 0 | 17 | 796 | 173 | 938 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285548.1 | 0 | 17 | 796 | 98 | 862 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297785.1 | 0 | 21 | 796 | 97 | 856 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304762.1 | 0 | 21 | 796 | 97 | 856 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3kmv_H | 0.003 | 659 | 726 | 58 | 118 | A Chain A, Crystal Structure Of Cbm42a From Clostridium Thermocellum |
| PDB | 3kmv_G | 0.003 | 659 | 726 | 58 | 118 | A Chain A, Crystal Structure Of Cbm42a From Clostridium Thermocellum |
| PDB | 3kmv_F | 0.003 | 659 | 726 | 58 | 118 | A Chain A, Crystal Structure Of Cbm42a From Clostridium Thermocellum |
| PDB | 3kmv_E | 0.003 | 659 | 726 | 58 | 118 | A Chain A, Crystal Structure Of Cbm42a From Clostridium Thermocellum |
| PDB | 3kmv_D | 0.003 | 659 | 726 | 58 | 118 | A Chain A, Crystal Structure Of Cbm42a From Clostridium Thermocellum |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES803398 | 296 | 22 | 317 | 0 |
| DR459841 | 283 | 35 | 317 | 0 |
| DY379042 | 280 | 52 | 331 | 0 |
| GR337718 | 274 | 79 | 352 | 0 |
| GO843439 | 370 | 223 | 589 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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