y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 898581 |
Family | GH1 |
Protein Properties | Length: 527 Molecular Weight: 60077 Isoelectric Point: 6.6168 |
Chromosome | Chromosome/Scaffold: 5 Start: 17917045 End: 17917962 |
Description | response regulator 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 35 | 511 | 0 |
RASFPEGFMFGTATAAFQVEGAVNEGCRGPSLWDIYTKKFPHRVKNHNADEAVDFYHRYKEDIQLMKKLNTDGFRLSISWPRIFPHGRMEKGISKEGVQF YHDLIDELFKNDITPLVTVFHWDTPADLEDEYGGFLSERIVPDFVEYANFTFHEYGDKVKHWITFNEPWVFSRSGYDVGKKAPGRCSPYVKDFGHLCQDG RSGFEPYVVSHNLLVGHAEAVDAFRKCEKCKGGKIGIAHSPAWFEPEDVEGGQNMVNRVLDFIIGWHLDPTTYGDYPQSMKDTVGTRLPRFTNAQKAKLK DSTDFVGINYYTSFFSKTGKPDSRNPTWATDALAEFEPKTVDGSIKIGSQPNTAKMAVYAKGLRKLLKYIKDRYNNPEIIITENGYGEDLGDKDTDLSVA LNDHNRKYYLQRHLLALNEAICEDKVNVTSYFLWSLMDNFEWQDGYTARFGVYYIDFKNNLTRMEKESAKWLSEFLK |
Full Sequence |
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Protein Sequence Length: 527 Download |
MKFPLLGLLL LLSIVGSTTR AEEGPVCPKT ETLSRASFPE GFMFGTATAA FQVEGAVNEG 60 CRGPSLWDIY TKKFPHRVKN HNADEAVDFY HRYKEDIQLM KKLNTDGFRL SISWPRIFPH 120 GRMEKGISKE GVQFYHDLID ELFKNDITPL VTVFHWDTPA DLEDEYGGFL SERIVPDFVE 180 YANFTFHEYG DKVKHWITFN EPWVFSRSGY DVGKKAPGRC SPYVKDFGHL CQDGRSGFEP 240 YVVSHNLLVG HAEAVDAFRK CEKCKGGKIG IAHSPAWFEP EDVEGGQNMV NRVLDFIIGW 300 HLDPTTYGDY PQSMKDTVGT RLPRFTNAQK AKLKDSTDFV GINYYTSFFS KTGKPDSRNP 360 TWATDALAEF EPKTVDGSIK IGSQPNTAKM AVYAKGLRKL LKYIKDRYNN PEIIITENGY 420 GEDLGDKDTD LSVALNDHNR KYYLQRHLLA LNEAICEDKV NVTSYFLWSL MDNFEWQDGY 480 TARFGVYYID FKNNLTRMEK ESAKWLSEFL KPGLKPSKSS KLHEEL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 7.0e-105 | 34 | 509 | 486 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 3.0e-105 | 30 | 509 | 487 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-122 | 38 | 505 | 482 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 5.0e-135 | 39 | 505 | 474 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 3.0e-161 | 34 | 509 | 486 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL24252.1 | 0 | 1 | 526 | 1 | 527 | AT3g21370/MHC9_5 [Arabidopsis thaliana] |
EMBL | CAA57913.1 | 0 | 1 | 503 | 1 | 504 | beta-glucosidase [Brassica napus] |
EMBL | CAC19786.1 | 0 | 5 | 526 | 10 | 528 | beta-glucosidase 1 [Arabidopsis thaliana] |
RefSeq | NP_175649.1 | 0 | 5 | 526 | 10 | 528 | BGLU18 (BETA GLUCOSIDASE 18); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_188774.2 | 0 | 1 | 526 | 1 | 527 | BGLU19 (BETA GLUCOSIDASE 19); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4atl_B | 0 | 33 | 506 | 17 | 507 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
PDB | 4atl_A | 0 | 33 | 506 | 17 | 507 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
PDB | 4atd_B | 0 | 33 | 506 | 17 | 507 | A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase |
PDB | 4atd_A | 0 | 33 | 506 | 17 | 507 | A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase |
PDB | 4a3y_B | 0 | 33 | 506 | 17 | 507 | A Chain A, Crystal Structure Of Raucaffricine Glucosidase From Ajmaline Biosynthesis Pathway |