| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 899522 |
| Family | GT28 |
| Protein Properties | Length: 467 Molecular Weight: 53202.6 Isoelectric Point: 8.5985 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT28 | 281 | 439 | 2.3e-33 |
| VLLMGGGEGMGPVQKTALALGDALYNSKERNPIGQLIVICGRNKVLASALASHEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALICGLPIILN DYIPGQEKGNVPYVVDNGAGVFTRSPKETAKIVANWFSNNKEELKKMSENALKLAQPEA | |||
| Full Sequence |
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| Protein Sequence Length: 467 Download |
| MMKVVSPRTR SDSITEKVFR RVYSNFNIST VEDEYIHRQR SSDYEKESRL RKRGLEEKEE 60 VMEMEQMGAE RIKTVLILMS DTGGGHRASA EAIRDAFKIE FGDDYRIIIK DVWKEYTGWP 120 LNDMERQYKF MVKHVGLWSV AFHGTSPKWI HKSYLSALAA YYAKEIEAGL MEYKPDIIIS 180 VHPLMQHIPL WVMKWQGLHK KVIFVTVITD LNTCHRTWFH HGVSRCYCPS KEVAKRALVD 240 GLDDSQIRVF GLPVRPSFPR TIIYKDELRR ELEIDLNLPA VLLMGGGEGM GPVQKTALAL 300 GDALYNSKER NPIGQLIVIC GRNKVLASAL ASHEWKIPVK VRGFETQMEK WMGACDCIIT 360 KAGPGTIAEA LICGLPIILN DYIPGQEKGN VPYVVDNGAG VFTRSPKETA KIVANWFSNN 420 KEELKKMSEN ALKLAQPEAV FDIVKDIHHL SQQQQQRIPL FNDFSY* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0707 | MurG | 3.0e-28 | 170 | 445 | 289 | + UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK13608 | PRK13608 | 1.0e-32 | 170 | 464 | 304 | + diacylglycerol glucosyltransferase; Provisional | ||
| PRK13609 | PRK13609 | 2.0e-41 | 71 | 452 | 401 | + diacylglycerol glucosyltransferase; Provisional | ||
| pfam06925 | MGDG_synth | 7.0e-69 | 86 | 254 | 169 | + Monogalactosyldiacylglycerol (MGDG) synthase. This family represents a conserved region of approximately 180 residues within plant and bacterial monogalactosyldiacylglycerol (MGDG) synthase (EC:2.4.1.46). In Arabidopsis, there are two types of MGDG synthase which differ in their N-terminal portion: type A and type B. | ||
| PLN02605 | PLN02605 | 0 | 75 | 454 | 382 | + monogalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009247 | glycolipid biosynthetic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030246 | carbohydrate binding |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001118301.1 | 0 | 1 | 361 | 1 | 361 | MGDC; 1,2-diacylglycerol 3-beta-galactosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_565352.1 | 0 | 1 | 466 | 1 | 465 | MGDC; 1,2-diacylglycerol 3-beta-galactosyltransferase [Arabidopsis thaliana] |
| RefSeq | XP_002263443.1 | 0 | 2 | 462 | 3 | 440 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324614.1 | 0 | 62 | 462 | 64 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331019.1 | 0 | 62 | 462 | 1 | 398 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2u_A | 0.005 | 344 | 444 | 242 | 348 | A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-glcnac Substrate Comp |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO466477 | 384 | 73 | 456 | 0 |
| EX529759 | 308 | 125 | 432 | 0 |
| GO845052 | 285 | 170 | 454 | 0 |
| DT339279 | 296 | 133 | 428 | 0 |
| HO604323 | 389 | 73 | 450 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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