| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 899601 |
| Family | GT48 |
| Protein Properties | Length: 1924 Molecular Weight: 220593 Isoelectric Point: 9.3234 |
| Chromosome | Chromosome/Scaffold: 4 Start: 1466640 End: 1468274 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 1040 | 1783 | 0 |
| VPTNLEAQRRIAFFTNSLFMDMPRAPRVRNMLSFSVLTPYYSEETVYSKNDLEMENEDGVSVVYYLQKIFPDEWTNFLERLGCKDETSVLESEENILQLR HWVSLRGQTLFRTVRGMMYYRRALKLQAFLDMANETEILAGYKAISEPTEEDKKSQRSLYTQLEAVADLKFTYVATCQNYGNQKRSGDRRATDILNLMVN NPSLRVAYIDEVEEREGGKVQKVFYSVLIKAVDNLDQEIYRIKLPGPAKIGEGKPENQNHALIFTRGEALQAIDMNQDHYLEEALKMRNLLEEFNEDHGV RAPTILGFREHIFTGSVSSLAWFMSNQETSFVTIGQRVLASPLKVRFHYGHPDVFDRIFHITRGGISKASRGINLSEDIFAGFNSTLRRGNVTHHEYIQV GKGRDVGLNQISLFEAKVACGNGEQTLSRDLYRLGHRFDFFRMMSCYFTTVGFYISSMIVVLTVYAFLYGRLYLSLSGVEEAIVKFAAAKGDSSLKAAMA SQSVVQLGLLMTLPMVMEIGLERGFRTALSDIIIMQLQLAPVFFTFSLGTKVHYYGRTILHGGAKYRATGRGFVVKHEKFAENYRMYSRSHFVKGMELMV LLICYRIYGKAAEDTVAYALVMGSTWFLVGSWLFAPFFFNPSGFEWQKIVDDWDDWNKWISSRGGIGVPAHKSWESWWEEEQEHLLHSGFFGKFWEIFLS LRYFIYQYGIVYHLNLTKESRMGKQQSIIVYGLSWLVIVAVMIV | |||
| Full Sequence |
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| Protein Sequence Length: 1924 Download |
| MAQSSTSHDS GPQGLMRRPS RSAATTVSIE VFDHEVVPAS LGTIAPILRV AAEIEHERPR 60 VAYLCRFYAF EKAHRLDPSS GGRGVRQFKT LLFQRLERDN ASSLASRVKK TDGREVESFY 120 QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ 180 EKNEIYAPYN ILPLDSAGAS QSVMQLEEVK AAVAALGNTR GLNWPSGFEQ HRKKTGNLDL 240 LDWLRAMFGF QRDNVRNQRE HLVCLLADNH IRLTPKPEPL NKLDDRAVDA VMTKLFKNYK 300 NWCKFLGRKH SLRLPQAAQD IQQRKILYMG LYLLIWGEAA NIRFMPECLC YIFHNMAYEL 360 HGLLAGNVSI VTGENIKPSY GGDDEAFLRK VITPIYRVVQ KEANKNANGK AAHSDWSNYD 420 DLNEYFWTPD CFSLGWPMRD DGDLFKSTRD TTQGKKGSLR KPGSTGKSNF TETRTFWHIY 480 HSFDRLWTFY LLALQAMIIL AFERVELREI LRKDVLYALS SIFITAAFLR FLQSVLDVIL 540 NFPGFHRWKF TDVLRNILKI VVSLAWCVVL PLCYAQSVSF APGKLKQWLS FLPQVKGVPP 600 LYIMAVALYL LPNVLAAIMF IFPMFRRWIE NSDWHIFRLL LWWSQPRIYV GRGMHESQIA 660 LIKYTIFWLL LFCCKFAFSY FLQVRLLVKP TNAIMSIRHV KYKWHEFFPN AEHNYGAVVS 720 LWLPVILVYF MDTQIWYAIF STICGGVIGA FDRLGEIRTL GMLRSRFQSL PGAFNTYLVP 780 SDKTRRRGFS LSKRFAEVTA ARRTEAAKFS QLWNEIISSF REEDLISDRE MDLLLVPYTS 840 DPSLKLIQWP PFLLASKIPI ALDMAAQFRT RDSDLWKRIC ADEYMKCAVI ECYESFKHVL 900 HTLVIGENEK RIIGIIIKEV ESNISKNSFL SNFRMAPLPA LCSKFVELVG ILKNADPAKR 960 DTLVLLLQDM LEVVTRDMMQ NENRELVELG HTNKESGRQL FAGTDAKPAI LFPPVATAQW 1020 DEQISRLHLL LTVKESAMDV PTNLEAQRRI AFFTNSLFMD MPRAPRVRNM LSFSVLTPYY 1080 SEETVYSKND LEMENEDGVS VVYYLQKIFP DEWTNFLERL GCKDETSVLE SEENILQLRH 1140 WVSLRGQTLF RTVRGMMYYR RALKLQAFLD MANETEILAG YKAISEPTEE DKKSQRSLYT 1200 QLEAVADLKF TYVATCQNYG NQKRSGDRRA TDILNLMVNN PSLRVAYIDE VEEREGGKVQ 1260 KVFYSVLIKA VDNLDQEIYR IKLPGPAKIG EGKPENQNHA LIFTRGEALQ AIDMNQDHYL 1320 EEALKMRNLL EEFNEDHGVR APTILGFREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAS 1380 PLKVRFHYGH PDVFDRIFHI TRGGISKASR GINLSEDIFA GFNSTLRRGN VTHHEYIQVG 1440 KGRDVGLNQI SLFEAKVACG NGEQTLSRDL YRLGHRFDFF RMMSCYFTTV GFYISSMIVV 1500 LTVYAFLYGR LYLSLSGVEE AIVKFAAAKG DSSLKAAMAS QSVVQLGLLM TLPMVMEIGL 1560 ERGFRTALSD IIIMQLQLAP VFFTFSLGTK VHYYGRTILH GGAKYRATGR GFVVKHEKFA 1620 ENYRMYSRSH FVKGMELMVL LICYRIYGKA AEDTVAYALV MGSTWFLVGS WLFAPFFFNP 1680 SGFEWQKIVD DWDDWNKWIS SRGGIGVPAH KSWESWWEEE QEHLLHSGFF GKFWEIFLSL 1740 RYFIYQYGIV YHLNLTKESR MGKQQSIIVY GLSWLVIVAV MIVLKIVSMG RKKFSADFQL 1800 MFRLLKLFLF IGSVVIVGML FHFLKLTVGD IMQSLLAFLP TGWALLQISQ VARQLMKAVG 1860 MWGSVKALAR GYEYIMGVVI FMPVTVLAWF PFVSEFQTRL LFNQAFSRGL QIQRILAGGK 1920 KQK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04652 | DUF605 | 3.0e-10 | 43 | 156 | 119 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 1.0e-51 | 323 | 439 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1040 | 1784 | 829 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK49452.2 | 0 | 3 | 1923 | 14 | 1931 | AF304372_1 putative beta-1,3-glucan synthase [Nicotiana alata] |
| GenBank | ACV04900.1 | 0 | 1 | 1923 | 1 | 1923 | callose synthase 5 [Arabidopsis thaliana] |
| EMBL | CAN80181.1 | 0 | 14 | 1923 | 2 | 1933 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_849953.2 | 0 | 1 | 1923 | 1 | 1923 | CALS5 (CALLOSE SYNTHASE 5); 1,3-beta-glucan synthase [Arabidopsis thaliana] |
| RefSeq | XP_002274337.1 | 0 | 6 | 1923 | 2 | 1918 | PREDICTED: hypothetical protein [Vitis vinifera] |
