y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 899988 |
Family | AA2 |
Protein Properties | Length: 293 Molecular Weight: 32583.1 Isoelectric Point: 5.6704 |
Chromosome | Chromosome/Scaffold: 4 Start: 4376608 End: 4376971 |
Description | vacuolar protein sorting 34 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 18 | 244 | 0 |
RRELRALISQKNCAPIMLRLAWHDAGTYDVKSKTGGPNGSIRTEEEYSHGANSGLKIAIDLCEEVKAKHPKITYGDLYQLAGVVAVEITGGPDISFVPGR KDSNACTEEGRLPDANQGFKHLKDVFYRMGLSDKDIVALSGAHTLGRAHLERSGFDGPWTRDPLKFDNSYFVELLKGEESEGLLKLSTDETLLDVPAFRR YVELYAKDEDAFFRDYAESHKKLSELG |
Full Sequence |
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Protein Sequence Length: 293 Download |
MAELVVDEVY LKEIDKARRE LRALISQKNC APIMLRLAWH DAGTYDVKSK TGGPNGSIRT 60 EEEYSHGANS GLKIAIDLCE EVKAKHPKIT YGDLYQLAGV VAVEITGGPD ISFVPGRKDS 120 NACTEEGRLP DANQGFKHLK DVFYRMGLSD KDIVALSGAH TLGRAHLERS GFDGPWTRDP 180 LKFDNSYFVE LLKGEESEGL LKLSTDETLL DVPAFRRYVE LYAKDEDAFF RDYAESHKKL 240 SELGFTTPTD SVTKEETQWI ITMELKLSKL GVAVVAAVVA FSCFSEIHKR MK* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 4.0e-46 | 17 | 225 | 219 | + Peroxidase. | ||
PLN02879 | PLN02879 | 7.0e-98 | 6 | 245 | 240 | + L-ascorbate peroxidase | ||
PLN02364 | PLN02364 | 3.0e-98 | 6 | 247 | 243 | + L-ascorbate peroxidase 1 | ||
cd00691 | ascorbate_peroxidase | 6.0e-143 | 5 | 246 | 249 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
PLN02608 | PLN02608 | 0 | 1 | 292 | 292 | + L-ascorbate peroxidase |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB52954.1 | 0 | 1 | 254 | 1 | 252 | ascorbate peroxidase [Gossypium hirsutum] |
GenBank | AAL35365.1 | 0 | 1 | 251 | 1 | 250 | AF442387_1 ascorbate peroxidase [Capsicum annuum] |
GenBank | ABA10744.1 | 0 | 1 | 292 | 1 | 287 | cytosolic ascorbate peroxidase isoform 4 [Solanum lycopersicum] |
EMBL | CAA06823.1 | 0 | 1 | 292 | 1 | 287 | ascorbate peroxidase [Arabidopsis thaliana] |
RefSeq | NP_195226.1 | 0 | 1 | 292 | 1 | 287 | APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1apx_D | 0 | 5 | 246 | 6 | 247 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_C | 0 | 5 | 246 | 6 | 247 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_B | 0 | 5 | 246 | 6 | 247 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_A | 0 | 5 | 246 | 6 | 247 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 2xj6_A | 0 | 5 | 246 | 6 | 247 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EV536666 | 253 | 1 | 253 | 0 |
EX109633 | 253 | 1 | 253 | 0 |
EX105430 | 253 | 1 | 253 | 0 |
EX108515 | 253 | 1 | 253 | 0 |
DK480917 | 253 | 1 | 253 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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