| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 901946 |
| Family | CBM43 |
| Protein Properties | Length: 118 Molecular Weight: 13022.9 Isoelectric Point: 6.8903 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 31 | 114 | 3.9e-29 |
| WCVSMQTAKDEQLEDNIGFACANGVDCRPILPSGACFKPNTTISHASYLMNSYYEQHGRTNNSCFFFFPNSAMLTSTDPSYNHC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 118 Download |
| MANVSPLLTF IVILLSSIMI NHLPVASSKQ WCVSMQTAKD EQLEDNIGFA CANGVDCRPI 60 LPSGACFKPN TTISHASYLM NSYYEQHGRT NNSCFFFFPN SAMLTSTDPS YNHCIYK* 120 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 9.0e-18 | 30 | 96 | 72 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-33 | 30 | 116 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK28052.1 | 4.00001e-40 | 1 | 116 | 1 | 114 | unknown [Arabidopsis thaliana] |
| GenBank | ABK28115.1 | 3e-38 | 1 | 116 | 1 | 112 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_001078361.1 | 3e-40 | 1 | 116 | 1 | 114 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_001118955.1 | 4.00001e-40 | 1 | 116 | 1 | 114 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_001118956.1 | 1e-38 | 1 | 116 | 1 | 114 | unknown protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 5e-24 | 27 | 114 | 9 | 94 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
