Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 902790 |
Family | CE8 |
Protein Properties | Length: 370 Molecular Weight: 40914.6 Isoelectric Point: 6.1056 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 53 | 343 | 0 |
ITVDPNGHGNFTKVQNAIDAVPDLSSSKTLIIINSGVYREKVMVSVNKTNIMMKGRGYQRTIIEWNDTSRSSGRTQDSYSFGIFAANFVAYNISFKNYAP EPEPGVEGAQAVAIRIDGDQAAFYGCGFYSAQDTVLDSNGRHYFKQCVIQGSIDFIYGKGRSLYDECLIRSIAKESTSGISGIITAQGRESIDEKSGFSF LKCKIEGTGKVWLGRPWRAYATVVFSQTYMSRIISPEGWNDWGNLTRDKTVTFGEHRCYGEGSDYKGRVPYAKQLTDSEASSFTDISYIDG |
Full Sequence |
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Protein Sequence Length: 370 Download |
MSIFLIVLLS LSTIHISSSS ESSFTSTTRT CSKHGELAFF GNHHNLPDNS LVITVDPNGH 60 GNFTKVQNAI DAVPDLSSSK TLIIINSGVY REKVMVSVNK TNIMMKGRGY QRTIIEWNDT 120 SRSSGRTQDS YSFGIFAANF VAYNISFKNY APEPEPGVEG AQAVAIRIDG DQAAFYGCGF 180 YSAQDTVLDS NGRHYFKQCV IQGSIDFIYG KGRSLYDECL IRSIAKESTS GISGIITAQG 240 RESIDEKSGF SFLKCKIEGT GKVWLGRPWR AYATVVFSQT YMSRIISPEG WNDWGNLTRD 300 KTVTFGEHRC YGEGSDYKGR VPYAKQLTDS EASSFTDISY IDGDQWLNGT KIPSELNIEE 360 HEDNLISSY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 1.0e-97 | 48 | 347 | 301 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 7.0e-98 | 47 | 347 | 308 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 6.0e-98 | 50 | 347 | 298 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 6.0e-121 | 50 | 347 | 305 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 1.0e-132 | 48 | 347 | 303 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO22722.1 | 0 | 50 | 369 | 88 | 407 | putative pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_181209.1 | 0 | 50 | 369 | 88 | 407 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264941.1 | 0 | 52 | 362 | 14 | 322 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326223.1 | 0 | 50 | 362 | 16 | 328 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519425.1 | 0 | 66 | 348 | 86 | 368 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 53 | 358 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8e-37 | 55 | 352 | 7 | 309 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-16 | 63 | 336 | 18 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-16 | 63 | 336 | 18 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-16 | 63 | 336 | 18 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |