| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 903327 |
| Family | AA1 |
| Protein Properties | Length: 582 Molecular Weight: 64119.2 Isoelectric Point: 8.9553 |
| Chromosome | Chromosome/Scaffold: 3 Start: 1775769 End: 1776101 |
| Description | low-molecular-weight cysteine-rich 18 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 27 | 564 | 0 |
| KAHHHEFIIQATKVKRLCETHNSITVNGMFPGPMLVVNNGDTLVVKVINRARYNITIHWHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIQGQEGTL WWHAHSSWLRATVYGSLLVLPPAGSSYPFTNPHRNVPLLLGEWWDANPVDVLRESIRTGGAPNNSDAYTINGQPGDLYKCSSQDTTIVPINVGETILLRV INSALNQPLFFTVANHKLTVVGADASYLKPFTTNVIVLGPGQTTDVLITGDQPPNRYYMAARAYQSAQNAPFGNTTTTAILQYKSAPCCGVGGGSGTKKG ISVKLIMPILPAYNDTNTVTRFSQSFRSLRRAEVPTEIDENLFVTVGLGLNNCPKNFRSRRCQGPNGTRFTASMNNISFALPSNYSLLQAHHHGIPGVFT TDFPAKPPVKFDYTGNNISRSLYQPDRGTKLYKLKYGSRVQIVLQDTGIVTPENHPIHLHGYDFYIIAEGFGNFNPKKDTAKFNLEDPPLRNTVGVPVNG WAVIRFVADNPGVWIMHCHLDAHISWGLAMAFLVENGN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 582 Download |
| MEIVKSLIFI SLAVVLLFAS IAEANIKAHH HEFIIQATKV KRLCETHNSI TVNGMFPGPM 60 LVVNNGDTLV VKVINRARYN ITIHWHGVRQ MRTGWADGPE FVTQCPIRPG SSYTYRFTIQ 120 GQEGTLWWHA HSSWLRATVY GSLLVLPPAG SSYPFTNPHR NVPLLLGEWW DANPVDVLRE 180 SIRTGGAPNN SDAYTINGQP GDLYKCSSQD TTIVPINVGE TILLRVINSA LNQPLFFTVA 240 NHKLTVVGAD ASYLKPFTTN VIVLGPGQTT DVLITGDQPP NRYYMAARAY QSAQNAPFGN 300 TTTTAILQYK SAPCCGVGGG SGTKKGISVK LIMPILPAYN DTNTVTRFSQ SFRSLRRAEV 360 PTEIDENLFV TVGLGLNNCP KNFRSRRCQG PNGTRFTASM NNISFALPSN YSLLQAHHHG 420 IPGVFTTDFP AKPPVKFDYT GNNISRSLYQ PDRGTKLYKL KYGSRVQIVL QDTGIVTPEN 480 HPIHLHGYDF YIIAEGFGNF NPKKDTAKFN LEDPPLRNTV GVPVNGWAVI RFVADNPGVW 540 IMHCHLDAHI SWGLAMAFLV ENGNGVLQTM EQPPADLPVC Y* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 6.0e-51 | 35 | 150 | 118 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 9.0e-69 | 9 | 558 | 577 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 4.0e-78 | 4 | 558 | 590 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-87 | 44 | 558 | 554 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 27 | 580 | 558 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK92474.1 | 0 | 27 | 580 | 7 | 550 | unknown [Populus trichocarpa] |
| RefSeq | NP_181568.1 | 0 | 1 | 580 | 1 | 580 | LAC5 (laccase 5); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002312186.1 | 0 | 27 | 580 | 31 | 574 | laccase 90a [Populus trichocarpa] |
| RefSeq | XP_002315131.1 | 0 | 1 | 580 | 1 | 575 | laccase 90c [Populus trichocarpa] |
| RefSeq | XP_002520796.1 | 0 | 25 | 580 | 31 | 577 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 30 | 558 | 5 | 521 | A Chain A, The Structure Of Soybean Peroxidase |
| PDB | 1asq_A | 0 | 30 | 558 | 5 | 521 | A Chain A, The Structure Of Soybean Peroxidase |
| PDB | 1asp_B | 0 | 30 | 558 | 5 | 521 | A Chain A, The Structure Of Soybean Peroxidase |
| PDB | 1asp_A | 0 | 30 | 558 | 5 | 521 | A Chain A, The Structure Of Soybean Peroxidase |
| PDB | 1aso_B | 0 | 30 | 558 | 5 | 521 | A Chain A, The Structure Of Soybean Peroxidase |
