Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 904630 |
Family | CBM43 |
Protein Properties | Length: 167 Molecular Weight: 17419.7 Isoelectric Point: 5.5719 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 22 | 99 | 9.8e-28 |
CLCRDGIEEKDLQTSIDYACGVLKDCNQIHDKGPCYQPNTVKSHCDWAVNTYFQRFGQISGSCNFSGTATTSQNPPST |
Full Sequence |
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Protein Sequence Length: 167 Download |
MRLLLGLLFL LALTTYSSAT YCLCRDGIEE KDLQTSIDYA CGVLKDCNQI HDKGPCYQPN 60 TVKSHCDWAV NTYFQRFGQI SGSCNFSGTA TTSQNPPSTV VTGCIYPSSP GSAGTTPTTG 120 TPSGTQPFQG PPAFGPVGVL DPSGNSASSL FISIALTLGF SVIAFL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-17 | 20 | 91 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-29 | 20 | 106 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF79417.1 | 5.99994e-41 | 12 | 166 | 69 | 245 | AC068197_27 F16A14.5 [Arabidopsis thaliana] |
GenBank | ACU19899.1 | 9.99967e-42 | 1 | 118 | 1 | 117 | unknown [Glycine max] |
RefSeq | NP_172838.2 | 2.94273e-44 | 19 | 166 | 19 | 185 | beta-1,3-glucanase-related [Arabidopsis thaliana] |
RefSeq | NP_671770.1 | 0 | 1 | 147 | 1 | 147 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | XP_002311337.1 | 3.00004e-41 | 1 | 126 | 1 | 128 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.00000000000001 | 14 | 108 | 6 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |