Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 905199 |
Family | CE8 |
Protein Properties | Length: 318 Molecular Weight: 35446.9 Isoelectric Point: 6.9942 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 7 | 297 | 0 |
VRVAQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQAARVIGTGTFGCGSVIVEGEDFIA ENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYVEGSVDFIFGNSTALLEHCHINCKSQGFITAQSRKSSQESTGYVFLR CVITGNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPWSRELMDEEAGHFVHHSFVD |
Full Sequence |
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Protein Sequence Length: 318 Download |
MATTRIVRVA QDGSGDYCSV QDAIDSVPLG NTCRTVIRLS PGIYRQPVYV PKRKNFITFA 60 GISPEITVLT WNNTASKIEH HQAARVIGTG TFGCGSVIVE GEDFIAENIT FENSAPEGSG 120 QAVAIRVTAD RCAFYNCRFL GWQDTLYLHH GKQYLKDCYV EGSVDFIFGN STALLEHCHI 180 NCKSQGFITA QSRKSSQEST GYVFLRCVIT GNGQSGYMYL GRPWGPFGRV VLAYTYMDAC 240 IRNVGWHNWG NAENERSACF YEYRCFGPGS CSSERVPWSR ELMDEEAGHF VHHSFVDPEQ 300 DRPWLCLRMG VKTPYSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 2.0e-86 | 7 | 297 | 308 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 4.0e-95 | 2 | 291 | 298 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 1.0e-96 | 1 | 305 | 307 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-107 | 13 | 305 | 300 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 317 | 317 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 6 | 317 | 5 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 1 | 317 | 1 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 5 | 317 | 4 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 4 | 317 | 3 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 5 | 317 | 4 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 7 | 296 | 9 | 302 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 7.00649e-45 | 9 | 309 | 7 | 297 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-24 | 6 | 292 | 8 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-24 | 6 | 292 | 8 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-24 | 6 | 292 | 8 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EG480743 | 273 | 1 | 273 | 0 |
DY292729 | 297 | 6 | 302 | 0 |
DY292725 | 305 | 6 | 310 | 0 |
GR994392 | 302 | 4 | 305 | 0 |
ES794113 | 289 | 3 | 291 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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