Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 907409 |
Family | GT48 |
Protein Properties | Length: 1935 Molecular Weight: 224738 Isoelectric Point: 8.811 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1053 | 1786 | 0 |
VPQNLEARRRITFFANSLFMNMPNAPRIRDMLSFSVLTPYYKEDVLYSEEDLNKENEDGISILFYLQKIYPDEWTNYLDRLNDPKLPEKDKSEFLREWVS YRGQTLARTVRGMMYYRQALELQCYQEVAGEQAEFSVSRAMASNDDNQKAFLERAKALADLKFTYVVSCQVYGNQKKSSDIHNRSCYTNILQLMLKYPSL RVAYVDEREETADAKSPKVFYSVLLKGGDKFDEEIYRIKLPGPPAEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYFEEAFKLRNVLEEFNKERVGRRK PTILGLREHIFTGSVSSLAWFMSNQESSFVTIGQRILANPLRVRFHYGHPDIFDRIFHITRGGVSKASKVINLSEDIFGGFNSTLRGGYVTHHEYIQVGK GRDVGLNPISIFEAKVANGNGEQTLSRDVYRLGHRFDFYRMLSFYFTTIGFYFSSMLTVLTVYAFLYGRMYMVMSGLEKEILRLASPNQLEALEQALATQ SIFQLGFLMVLPMVMEIGLEHGFRSAIVDFFIMQLQLASVFFTFQLGTKSHYYGRTILHGGSKYRPTGRGFVVFHAKFAENYRLYSRSHFVKGLELLLLL VVYQIYGNSFRSSSLYLYITVSMWFMVGSWLFAPFIFNPSGFEWQKTVDDWTDWKRWLGDRGGIGIPVEKSWESWWNVEQEHLKHTSIRGRILEITLALR FFIYQYGIVYQLNISQRSKSFLVYGLSWVVLLTS |
Full Sequence |
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Protein Sequence Length: 1935 Download |
MEASSSGTAE LPRSLSRRAP SRATTMMIDR PNEDASAMDS ELVPSSLASI APILRVANEI 60 EKENPRVAYL CRFHAFEKAH RMDATSSGRG VRQFKTYLLH RLEKEEVETK PQLAKNDPRE 120 IQAYYQNFYE KYIKEGETSR KPEEMARLYQ IASVLYDVLK TVVPSPKVDY ETRRYAEEVE 180 KKRDRYEHYN ILPLYAVGTK PAIVELPEVK AAFSAVCNVR NLPRRRVHLP SNAPNEMRKA 240 RTKLNDILEW LASEFGFQRG NVANQREHII LLLANADIRN RNDEEYDELK PSTVIELMDK 300 TFKSYYSWCK YLHSTPNLKF PEGCDKQQLR LIYISLYLLI WGEASNVRFM PECICYIFHN 360 MANDVYGILF SNVEAVSGET YETEEVIDEE SFLRNVITPI YQVIRKEARR NKGGTASHSQ 420 WRNYDDLNEY FWSKKCFKIG WPLDLKADFF LNADEITPQN ERLNQVTYGK SKPKTNFVEV 480 RTFWNLFRDF DRMWIFLVMA FQAMVIVGWH GSGSLGDIFD KDVFKTVLTI FITSAYLTLL 540 QASLDIILNF NAWKNFKFSQ ILRYLLKFAV AAMWAVLLPI AYSKSVQRPT GVVKFFSTWT 600 GDWKDQSFYT YAVLFYVLPN ILAALLFLVP PFRRAMECSD MRIIKVIMWW AQASIKLFFW 660 FLSILPKLYV GRGMHEDMFS LFKYTTFWIM LLISKLAFNY YVEILPLITP TKMIMNLHIG 720 HYQWHEFFPH ATNNIGVVIA IWAPIVLVYL MDTQIWYAIF STLFGGIHGA FSHLGEIRTL 780 GMLRSRFESI PTAFSRTLMP SEDANREHAD DYVDQKNITN FSQVWNEFIY SMRSEDKISD 840 RDRDLLLVPS SSGDVSVIQW PPFLLASKIP IAVDMAKDFR GKEDAELFRK IKSDSYMYFA 900 VIESYETLKK IIYALLEDEA DRRVMNQVFL EVDMSIQQQR FIYEFRMSGL PLLSDKLEKF 960 LSILLSDYED QGTYKSQLIN VFQDVIEIIT QDLLVNGHEI LERARVHSPD IKNDEKEQRF 1020 EKINIHLVRD KCWREKVIRL HLLLSVKESA INVPQNLEAR RRITFFANSL FMNMPNAPRI 1080 RDMLSFSVLT PYYKEDVLYS EEDLNKENED GISILFYLQK IYPDEWTNYL DRLNDPKLPE 1140 KDKSEFLREW VSYRGQTLAR TVRGMMYYRQ ALELQCYQEV AGEQAEFSVS RAMASNDDNQ 1200 KAFLERAKAL ADLKFTYVVS CQVYGNQKKS SDIHNRSCYT NILQLMLKYP SLRVAYVDER 1260 EETADAKSPK VFYSVLLKGG DKFDEEIYRI KLPGPPAEIG EGKPENQNHA IIFTRGEALQ 1320 TIDMNQDNYF EEAFKLRNVL EEFNKERVGR RKPTILGLRE HIFTGSVSSL AWFMSNQESS 1380 FVTIGQRILA NPLRVRFHYG HPDIFDRIFH ITRGGVSKAS KVINLSEDIF GGFNSTLRGG 1440 YVTHHEYIQV GKGRDVGLNP ISIFEAKVAN GNGEQTLSRD VYRLGHRFDF YRMLSFYFTT 1500 IGFYFSSMLT VLTVYAFLYG RMYMVMSGLE KEILRLASPN QLEALEQALA TQSIFQLGFL 1560 MVLPMVMEIG LEHGFRSAIV DFFIMQLQLA SVFFTFQLGT KSHYYGRTIL HGGSKYRPTG 1620 RGFVVFHAKF AENYRLYSRS HFVKGLELLL LLVVYQIYGN SFRSSSLYLY ITVSMWFMVG 1680 SWLFAPFIFN PSGFEWQKTV DDWTDWKRWL GDRGGIGIPV EKSWESWWNV EQEHLKHTSI 1740 RGRILEITLA LRFFIYQYGI VYQLNISQRS KSFLVYGLSW VVLLTSLLVL KMVSMGRRRF 1800 GTDFQLMFRI LKALLFLGFL SIMTVLFVVF KLTLTDLSAS ILAFLPTGWA ILLIGQVLRS 1860 PIKALGIWDS VKELGRAYEK IMGLVIFAPI AVLSWFPIVS EFQARLLFNQ AFSRGLQISM 1920 ILAGRKDKAA SSHV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 1.0e-9 | 48 | 161 | 127 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 3.0e-47 | 341 | 444 | 105 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1053 | 1771 | 800 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF24822.1 | 0 | 13 | 1932 | 22 | 1928 | AC007592_15 F12K11.17 [Arabidopsis thaliana] |
RefSeq | NP_172136.1 | 0 | 13 | 1932 | 22 | 1931 | ATGSL07 (glucan synthase-like 7); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | NP_191469.2 | 0 | 1 | 1933 | 1 | 1933 | ATGSL11 (glucan synthase-like 11); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Swiss-Prot | Q9LYS6 | 0 | 1 | 1933 | 1 | 1920 | CALS6_ARATH RecName: Full=Putative callose synthase 6; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 11 |
RefSeq | XP_002307554.1 | 0 | 3 | 1929 | 2 | 1930 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2lxm_A | 0.001 | 49 | 176 | 16 | 145 | B Chain B, Lip5-chmp5 |
PDB | 2lxl_A | 0.001 | 49 | 176 | 16 | 145 | A Chain A, Lip5(mit)2 |