| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 90809 |
| Family | AA3 |
| Protein Properties | Length: 506 Molecular Weight: 54859.9 Isoelectric Point: 7.5846 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 22 | 502 | 0 |
| EQYDYIIVGGGTAGCPLAATLSRYFRVLVLERGPSPYGNANITRIENFGRSLNDTEGQFTPAQAFTSTDGVRNTRPRVLGGGSCLNAGFYTRASPDYVRR VGWDARLVNQSYPWVERVVAFVPQLGAFQSAFRAGLLETGVTPDNGATFDHIYGTKTGGSIFDHQGNRHTAADLLRYATARNILVLLRASVQRILFDTSG YQPRAIGVQYRDANSRMHIARLNSNRQSQVILSAGAMGSPQLLMLNGIGPRAHLESMGIRVLVNLPGVGQGMADNPMNTVYLLSPAPVETSLIQVVGITH YGSFIEAGSGELDGLSAGVLLEKVIGPRSSGQMTLTSLDAADNPQVTFNYFQDPEDLQSCVEGINQIEEIILSSSMRRFRYDAQALPSGGTVASPVRADS TLRSSVNVTLASFCRSTVQTIWHYHGGCQVGRVVDSDYHVLGVDALRVIDGSTFNFSPGTNPQATVMMLGRYMGLRIIAER | |||
| Full Sequence |
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| Protein Sequence Length: 506 Download |
| MGADETYPYS FLRDAADSPV YEQYDYIIVG GGTAGCPLAA TLSRYFRVLV LERGPSPYGN 60 ANITRIENFG RSLNDTEGQF TPAQAFTSTD GVRNTRPRVL GGGSCLNAGF YTRASPDYVR 120 RVGWDARLVN QSYPWVERVV AFVPQLGAFQ SAFRAGLLET GVTPDNGATF DHIYGTKTGG 180 SIFDHQGNRH TAADLLRYAT ARNILVLLRA SVQRILFDTS GYQPRAIGVQ YRDANSRMHI 240 ARLNSNRQSQ VILSAGAMGS PQLLMLNGIG PRAHLESMGI RVLVNLPGVG QGMADNPMNT 300 VYLLSPAPVE TSLIQVVGIT HYGSFIEAGS GELDGLSAGV LLEKVIGPRS SGQMTLTSLD 360 AADNPQVTFN YFQDPEDLQS CVEGINQIEE IILSSSMRRF RYDAQALPSG GTVASPVRAD 420 STLRSSVNVT LASFCRSTVQ TIWHYHGGCQ VGRVVDSDYH VLGVDALRVI DGSTFNFSPG 480 TNPQATVMML GRYMGLRIIA ERMRR* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05199 | GMC_oxred_C | 3.0e-25 | 348 | 491 | 149 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| TIGR01810 | betA | 1.0e-34 | 25 | 491 | 553 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
| TIGR03970 | Rv0697 | 3.0e-36 | 25 | 491 | 521 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| COG2303 | BetA | 2.0e-46 | 22 | 505 | 559 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| PLN02785 | PLN02785 | 0 | 6 | 505 | 558 | + Protein HOTHEAD | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI34759.1 | 0 | 9 | 503 | 32 | 572 | unnamed protein product [Vitis vinifera] |
| GenBank | EAY87068.1 | 0 | 9 | 503 | 28 | 574 | hypothetical protein OsI_08464 [Oryza sativa Indica Group] |
| GenBank | EEE57571.1 | 0 | 9 | 503 | 28 | 561 | hypothetical protein OsJ_07923 [Oryza sativa Japonica Group] |
| RefSeq | XP_002298074.1 | 0 | 9 | 505 | 31 | 572 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002446965.1 | 0 | 9 | 504 | 36 | 586 | hypothetical protein SORBIDRAFT_06g025960 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gdp_B | 0 | 3 | 502 | 5 | 517 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3gdp_A | 0 | 3 | 502 | 5 | 517 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3gdn_B | 0 | 3 | 502 | 5 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 3gdn_A | 0 | 3 | 502 | 5 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 1ju2_B | 0 | 3 | 502 | 5 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
| suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO796743 | 530 | 25 | 502 | 0 |
| CK271873 | 315 | 17 | 331 | 0 |
| CO080148 | 297 | 3 | 297 | 0 |
| CO078158 | 253 | 81 | 332 | 0 |
| DT559636 | 269 | 5 | 271 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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