| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 909881 |
| Family | GH14 |
| Protein Properties | Length: 535 Molecular Weight: 58321.7 Isoelectric Point: 5.9696 |
| Chromosome | Chromosome/Scaffold: 1 Start: 546617 End: 548110 |
| Description | NAC domain containing protein 49 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 90 | 494 | 0 |
| FVGLPLDTVSDCNNVNHLKAITAGLKALKLLGVQGIELPIFWGVVEKEAVGRYEWSGYLAVAEIVKKVGLKLHASLSFHGSKHPEIGLPDWVAKIGEAEP GIYFTDRYGQQYKDCLSFAVDDVPVLHGKTPMEVYRGFCDSFKSAFSDYMGNTITGITLGLGPDGELRYPSHQQDVKCSGAGEFQCYDKHMLTALKAYAE STGNPLWGLGGPHDAPAYDQQPNSSSFFSDGGSWESQYGDFFLSWYSSLLTSHADRVLSVTSSAFSGIGVPLCGKLPLLHQWHKLRSQPSELTAGFYSSN GQDRYEAIAEIFAKNSCRVIIPGMDLSDEHQSPESLSSPESLLAHIKASCKKQGVVVSGQNSSTPLPGGFERIVENLKDENVGIDLFTYQRMGALFFSPE HFHAF | |||
| Full Sequence |
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| Protein Sequence Length: 535 Download |
| MEVSVIGNPQ ARIFRAELAY RELGFRFGSV VISGESRNRV TFCNQGSKWK EIAIRCSHRS 60 VKCEAIVSDD APPFLNSTSK SKSLESVKLF VGLPLDTVSD CNNVNHLKAI TAGLKALKLL 120 GVQGIELPIF WGVVEKEAVG RYEWSGYLAV AEIVKKVGLK LHASLSFHGS KHPEIGLPDW 180 VAKIGEAEPG IYFTDRYGQQ YKDCLSFAVD DVPVLHGKTP MEVYRGFCDS FKSAFSDYMG 240 NTITGITLGL GPDGELRYPS HQQDVKCSGA GEFQCYDKHM LTALKAYAES TGNPLWGLGG 300 PHDAPAYDQQ PNSSSFFSDG GSWESQYGDF FLSWYSSLLT SHADRVLSVT SSAFSGIGVP 360 LCGKLPLLHQ WHKLRSQPSE LTAGFYSSNG QDRYEAIAEI FAKNSCRVII PGMDLSDEHQ 420 SPESLSSPES LLAHIKASCK KQGVVVSGQN SSTPLPGGFE RIVENLKDEN VGIDLFTYQR 480 MGALFFSPEH FHAFTVFVRN LSQFELSSDD KAADVEDETV SIGSGTGAPS LQTA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 5.0e-73 | 54 | 501 | 467 | + beta-amylase | ||
| PLN02801 | PLN02801 | 7.0e-82 | 73 | 501 | 447 | + beta-amylase | ||
| PLN02161 | PLN02161 | 5.0e-83 | 79 | 502 | 450 | + beta-amylase | ||
| PLN00197 | PLN00197 | 3.0e-90 | 60 | 518 | 487 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 3.0e-103 | 77 | 503 | 438 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK85300.1 | 0 | 1 | 534 | 1 | 537 | AF402598_1 putative beta-amylase BMY3 [Arabidopsis thaliana] |
| EMBL | CAI39245.1 | 0 | 1 | 534 | 1 | 536 | beta-amylase [Glycine max] |
| EMBL | CAN66037.1 | 0 | 1 | 526 | 1 | 532 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_197368.1 | 0 | 1 | 534 | 1 | 536 | BMY3; beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002276777.1 | 0 | 1 | 526 | 1 | 532 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 87 | 501 | 6 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1v3i_A | 0 | 84 | 501 | 9 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1q6g_A | 0 | 84 | 501 | 9 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1q6d_A | 0 | 84 | 501 | 9 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1wdp_A | 0 | 84 | 501 | 9 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX130723 | 289 | 191 | 479 | 0 |
| FY443880 | 295 | 53 | 346 | 0 |
| FY448068 | 268 | 81 | 347 | 0 |
| HO781436 | 385 | 135 | 517 | 0 |
| HO781436 | 105 | 38 | 141 | 2e-20 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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