| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 910790 |
| Family | CE8 |
| Protein Properties | Length: 646 Molecular Weight: 70375.9 Isoelectric Point: 7.3096 |
| Chromosome | Chromosome/Scaffold: 1 Start: 4132534 End: 4134617 |
| Description | Transducin/WD40 repeat-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 251 | 546 | 0 |
| DIVVAQDGSGQYKTINEALNYVPKKKNTTFVVHIKAGIYKEYVQVNRSMTHLVFIGDGPEKTVISGSKSYKDGITTYKTATVAIVGDHFIAKNIGFENTA GAIKHQAVAIRVLSDESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIV GEPDYLAVKENSKAYLGRPWKEYSRTIIMNTFIPDFIPPEGWQPWLGDFGLNTLFYSEVQNTGPGAPITKRVTWPGIKKLSEEEILTFTPAQYIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 646 Download |
| MSYGYDDDAK RKKRYVIISI SSVLLISMVV AVTIGVSVNK SDNGGEGEIT TSVKAIKDVC 60 APTDYKETCE DTLRKDAKNT SDPLELVKTA FNATMKQISD VAKKSQTMIE LQKDPRTKMA 120 LDQCKELMDY AIGELSKSFE ELGRFEFHKV DEALIKLRIW LSATISHEQT CLDGFQGTQG 180 NAGETIKKAL KTAVQLTHNG LAMVSEMSNY LGQMQIPEMN SRRLLSQEFP SWMDGRARRL 240 LNAPMSEVKL DIVVAQDGSG QYKTINEALN YVPKKKNTTF VVHIKAGIYK EYVQVNRSMT 300 HLVFIGDGPE KTVISGSKSY KDGITTYKTA TVAIVGDHFI AKNIGFENTA GAIKHQAVAI 360 RVLSDESIFY NCKFDGYQDT LYAHSHRQFY RDCTISGTID FLFGDAAAVF QNCTLLVRKP 420 LLNQACPITA HGRKDPREST GFVLQGCTIV GEPDYLAVKE NSKAYLGRPW KEYSRTIIMN 480 TFIPDFIPPE GWQPWLGDFG LNTLFYSEVQ NTGPGAPITK RVTWPGIKKL SEEEILTFTP 540 AQYIQGDAWI PGKGVPYIPG LFTGNGSTTN PTELGSTNST ITGSGSSSNT TGSSDSPSTV 600 VSPSTSPPAG HLGSPPATPS TIVSPSTSPP ADHLGSPPTT PSSAP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 7.0e-160 | 2 | 557 | 583 | + pectinesterase | ||
| PLN02217 | PLN02217 | 0 | 1 | 572 | 572 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02990 | PLN02990 | 0 | 4 | 558 | 569 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 251 | 547 | 298 | + Pectinesterase. | ||
| PLN02745 | PLN02745 | 0 | 54 | 562 | 523 | + Putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC42986.1 | 0 | 1 | 644 | 1 | 652 | putative pectinesterase [Arabidopsis thaliana] |
| RefSeq | NP_187212.1 | 0 | 1 | 644 | 1 | 652 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_198139.1 | 0 | 1 | 643 | 1 | 657 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002314364.1 | 0 | 39 | 564 | 43 | 571 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512459.1 | 0 | 1 | 561 | 1 | 579 | Pectinesterase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 246 | 561 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 251 | 562 | 4 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 6e-22 | 261 | 539 | 43 | 353 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 1e-21 | 262 | 551 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-21 | 262 | 551 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
