Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 911989 |
Family | CE8 |
Protein Properties | Length: 454 Molecular Weight: 50372.5 Isoelectric Point: 4.7626 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 143 | 438 | 0 |
LVVAQNGTSNYTTIGEAVSAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAG LASHQAVALRSSSDLSAFYRCSFESFQDTLYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSSQPTGISIISSKILA APDLIPVQANFKAYLGRPWQLYSRTVIMKSFIGDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETAEEATQFSVGPFIEG |
Full Sequence |
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Protein Sequence Length: 454 Download |
MTSLSSNLSH RDRCAFDDCL ELLDDTVFDL TTAVSELRSH SPELHNVKMF LSAAMTNTRT 60 CLDGFASSNN DENNNNKTYG VAESLKESLF NISSHVSDSL AMLEEIPGNI PGKLEEDVGF 120 PMWVSGSDRN LLQDPVDETK VNLVVAQNGT SNYTTIGEAV SAAPNSSETR FVIYIKCGEY 180 FENIEIPREK TMIMFIGDGI GRTVIKANRS YADGWTAFHS ATVGVRGSGF IAKDLSFVNY 240 AGLASHQAVA LRSSSDLSAF YRCSFESFQD TLYVHSHKQF YRECDIYGTV DFIFGDASVV 300 FQNCSLYARR PNPNQKIIYT AQGRENSSQP TGISIISSKI LAAPDLIPVQ ANFKAYLGRP 360 WQLYSRTVIM KSFIGDLVDP AGWLKWKDDF ALETLYYGEY MNEGPGSNMT NRVQWPGFKR 420 IETAEEATQF SVGPFIEGNK WLNSTGIPFT IDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 8.0e-159 | 15 | 453 | 459 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-159 | 10 | 450 | 444 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 2.0e-165 | 7 | 449 | 459 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02933 | PLN02933 | 0 | 1 | 453 | 455 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 142 | 439 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ68111.1 | 0 | 4 | 449 | 73 | 518 | pectinesterase [Brassica napus] |
RefSeq | NP_192139.1 | 0 | 2 | 451 | 80 | 530 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_192141.1 | 0 | 1 | 453 | 63 | 518 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002301486.1 | 0 | 12 | 453 | 7 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523113.1 | 0 | 8 | 453 | 109 | 556 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 142 | 453 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 142 | 453 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-21 | 139 | 362 | 2 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-21 | 139 | 362 | 2 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-21 | 139 | 362 | 2 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778758 | 451 | 12 | 449 | 0 |
HO852920 | 430 | 32 | 454 | 0 |
ES850416 | 339 | 112 | 449 | 0 |
DK497466 | 287 | 128 | 414 | 0 |
FD975779 | 232 | 221 | 452 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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