| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 912308 |
| Family | GH35 |
| Protein Properties | Length: 449 Molecular Weight: 51267.6 Isoelectric Point: 8.1424 |
| Chromosome | Chromosome/Scaffold: 1 Start: 10857847 End: 10862341 |
| Description | transmembrane receptors;ATP binding |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 49 | 287 | 0 |
| LIINGKRELLFSVSVHYPRSTPDMWPSIIDKARIGGLNTIQTYVFWNVHEPEHRKYDFKGRFDLVTFIKLIQEKGLYVTLRLGPFIQAEWNHGGLPYWLR EVPEVYFRTDNEPFKEHTERYVRKILGMMKEEKLLASQRRSHHLGTENECNAVQLAYKENGERYIKWAANLVESMKLGIPWVMCKQNNASDNLINACNGR HCFEFLGILQLIEQSEDIAFSVARYFSKNGSHVNYYMMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 449 Download |
| MKSRTRYLIA ILLVVSLCSK ASHGHGGGEV DDDNDEKKKK GVTYDGTSLI INGKRELLFS 60 VSVHYPRSTP DMWPSIIDKA RIGGLNTIQT YVFWNVHEPE HRKYDFKGRF DLVTFIKLIQ 120 EKGLYVTLRL GPFIQAEWNH GGLPYWLREV PEVYFRTDNE PFKEHTERYV RKILGMMKEE 180 KLLASQRRSH HLGTENECNA VQLAYKENGE RYIKWAANLV ESMKLGIPWV MCKQNNASDN 240 LINACNGRHC FEFLGILQLI EQSEDIAFSV ARYFSKNGSH VNYYMMVDRY HIPRSFMKEE 300 KKKNMLVILE EEPGVKLEAI DFVLVNRDTI CSYVGEDYPV SVKSWKRERP KIASRSKDMR 360 LKAVMKCPPE KQMVAVEFAS FGDPTGTCGN FTMGKCSASK SKEVVEKDRT PVTGVFGGES 420 LFDSSSERDF WGQRVSGDSE DIGSADQV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 4.0e-5 | 64 | 173 | 128 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| PLN03059 | PLN03059 | 1.0e-15 | 290 | 427 | 147 | + beta-galactosidase; Provisional | ||
| COG1874 | LacA | 4.0e-16 | 44 | 197 | 162 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 4.0e-85 | 43 | 291 | 271 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-92 | 48 | 285 | 277 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB64750.1 | 0 | 1 | 285 | 9 | 308 | putative beta-galactosidase [Arabidopsis thaliana] |
| EMBL | CAB64750.1 | 0 | 290 | 408 | 685 | 803 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_001154292.1 | 0 | 1 | 285 | 1 | 306 | glycosyl hydrolase family 35 protein [Arabidopsis thaliana] |
| Swiss-Prot | Q9SCU8 | 0 | 1 | 285 | 9 | 308 | BGL14_ARATH RecName: Full=Beta-galactosidase 14; Short=Lactase 14; Flags: Precursor |
| Swiss-Prot | Q9SCU8 | 0 | 290 | 408 | 685 | 803 | BGL14_ARATH RecName: Full=Beta-galactosidase 14; Short=Lactase 14; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 9e-27 | 47 | 246 | 13 | 212 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 8e-21 | 34 | 178 | 3 | 147 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 8e-21 | 34 | 178 | 3 | 147 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 8e-21 | 34 | 178 | 3 | 147 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_A | 8e-21 | 34 | 178 | 3 | 147 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
