CAZyme Information

Basic Information
SpeciesArabidopsis lyrata
Cazyme ID912565
FamilyGT13
Protein PropertiesLength: 360 Molecular Weight: 40525.7 Isoelectric Point: 8.7828
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT132233081.1e-27
  AQMPLAAVVIMARSRTDYLERTVKSVLTYQSPVASKHPLFISQDGSDQAVKSKALSYNQLTYMQHLDFEPVITERPGELIAYYKIA
Full Sequence
Protein Sequence     Length: 360     Download
MMLIKRSNLL IPQTKRTCTT NLMVANNEGQ HFPSCNTKRT LSVASEINPQ KPIALTSLLQ    60
PRNTSSSTEL LIATVVSTMA LHSKEPSTVP PLDSEWVWHC HRLDPAISEP ANISALEKCT    120
TYDLVSTVKR QSPFYYQVSR AHVDNDVFLQ EAVARYKAFL YLIKGNRERS IKLFCVPTYD    180
IDLIWHTHQL HAHSYCNDLT KMIGKVLDYI LGNITSLPPR TFAQMPLAAV VIMARSRTDY    240
LERTVKSVLT YQSPVASKHP LFISQDGSDQ AVKSKALSYN QLTYMQHLDF EPVITERPGE    300
LIAYYKIAPS SWNDNGQKQF VQDVMIPGKF DIAGHSHQLF HVLMVVGAFT HYRAGLCVS*    360

Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG1272COG12720.00232935426+
pfam03006HlyIII4.0e-732635227+
cd02514GT13_GLCNAC-TI4.0e-25228323148+
pfam03071GNT-I2.0e-31198323180+
pfam07173DUF13998.0e-3811419885+
Gene Ontology
GO TermDescription
GO:0000139Golgi membrane
GO:0003827alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0006487protein N-linked glycosylation
GO:0016021integral to membrane
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_001031396.11.4013e-45107209152252unknown protein [Arabidopsis thaliana]
RefSeqNP_179851.208920979252unknown protein [Arabidopsis thaliana]
RefSeqNP_195503.108920979250glycine-rich protein [Arabidopsis thaliana]
RefSeqXP_002321500.11.96182e-448520774247predicted protein [Populus trichocarpa]
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EV160569174852090
EV161225174852090
EV1612253554880.001
EV161225921232080.48
EV160569461672086.1
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00911.3Aquca_007_00911.4Aquca_007_00911.2Aquca_007_00911.1Aquca_007_00911.5
Arabidopsis lyrata490588
Arabidopsis thalianaAT4G38240.1AT4G38240.2AT4G38240.3
Brachypodium distachyonBradi3g60820.3Bradi3g60820.1Bradi3g60820.2
Brassica rapaBra033557
Carica papayaevm.TU.contig_28580.1.22.235evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.22.235
Capsella rubellaCarubv10007540m
Citrus clementinaCiclev10028418m
Citrus sinensisorange1.1g019888morange1.1g012912morange1.1g012941m
Cucumis sativusCucsa.099720.1Cucsa.099720.2
Eucalyptus grandisEucgr.L00584.1Eucgr.L00583.1Eucgr.H04987.1Eucgr.H04987.2Eucgr.H04989.3
Eucgr.H04989.2Eucgr.H04989.4Eucgr.H04989.1
Fragaria vescamrna17328.1-v1.0-hybrid
Glycine maxGlyma04g00200.1Glyma06g00230.1
Gossypium raimondiiGorai.008G014000.2Gorai.008G014000.3Gorai.008G014000.1
Linum usitatissimumLus10022994Lus10001389
Malus domesticaMDP0000173465.283.435MDP0000170967.230.351MDP0000170967.22.209MDP0000170967.22.209MDP0000173465.283.435
MDP0000173465.22.268MDP0000173465.22.268MDP0000170967.230.351
Manihot esculentacassava4.1_024783m
Medicago truncatulaMedtr3g118520.1Medtr3g118520.2Medtr3g118520.3
Mimulus guttatusmgv1a006517mmgv1a006750m
Oryza sativaLOC_Os02g58590.1.304.426LOC_Os02g58590.1.304.426LOC_Os02g58590.1.22.283LOC_Os02g58590.1.22.283
Panicum virgatumPavirv00053907mPavirv00020030m
Physcomitrella patensPp1s100_54V6.1Pp1s246_61V6.1
Phaseolus vulgarisPhvul.009G115600.1
Picea abiesMA_901813g0010
Populus trichocarpaPotri.009G168000.2Potri.009G168000.1Potri.009G168000.4Potri.004G206900.3Potri.004G206900.1
Potri.004G206900.2Potri.009G168000.3
Prunus persicappa006221m
Ricinus communis29675.m000398.22.23129675.m000398.232.34829675.m000398.232.34829675.m000398.22.231
Setaria italicaSi006441mSi006440m
Selaginella moellendorffii268301
Sorghum bicolorSb08g003660.1
Thellungiella halophilaThhalv10025211mThhalv10025208mThhalv10025250m
Vitis viniferaGSVIVT01002028001GSVIVT01002907001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny