| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 912565 |
| Family | GT13 |
| Protein Properties | Length: 360 Molecular Weight: 40525.7 Isoelectric Point: 8.7828 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT13 | 223 | 308 | 1.1e-27 |
| AQMPLAAVVIMARSRTDYLERTVKSVLTYQSPVASKHPLFISQDGSDQAVKSKALSYNQLTYMQHLDFEPVITERPGELIAYYKIA | |||
| Full Sequence |
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| Protein Sequence Length: 360 Download |
| MMLIKRSNLL IPQTKRTCTT NLMVANNEGQ HFPSCNTKRT LSVASEINPQ KPIALTSLLQ 60 PRNTSSSTEL LIATVVSTMA LHSKEPSTVP PLDSEWVWHC HRLDPAISEP ANISALEKCT 120 TYDLVSTVKR QSPFYYQVSR AHVDNDVFLQ EAVARYKAFL YLIKGNRERS IKLFCVPTYD 180 IDLIWHTHQL HAHSYCNDLT KMIGKVLDYI LGNITSLPPR TFAQMPLAAV VIMARSRTDY 240 LERTVKSVLT YQSPVASKHP LFISQDGSDQ AVKSKALSYN QLTYMQHLDF EPVITERPGE 300 LIAYYKIAPS SWNDNGQKQF VQDVMIPGKF DIAGHSHQLF HVLMVVGAFT HYRAGLCVS* 360 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1272 | COG1272 | 0.002 | 329 | 354 | 26 | + Predicted membrane protein, hemolysin III homolog [General function prediction only] | ||
| pfam03006 | HlyIII | 4.0e-7 | 326 | 352 | 27 | + Haemolysin-III related. Members of this family are integral membrane proteins. This family includes a protein with hemolytic activity from Bacillus cereus. It has been proposed that YOL002c encodes a Saccharomyces cerevisiae protein that plays a key role in metabolic pathways that regulate lipid and phosphate metabolism. In eukaryotes, members are seven-transmembrane pass molecules found to encode functional receptors with a broad range of apparent ligand specificities, including progestin and adipoQ receptors, and hence have been named PAQR proteins. The mammalian members include progesterone binding proteins. Unlike the case with GPCR receptor proteins, the evolutionary ancestry of the members of this family can be traced back to the Archaea. | ||
| cd02514 | GT13_GLCNAC-TI | 4.0e-25 | 228 | 323 | 148 | + GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13. | ||
| pfam03071 | GNT-I | 2.0e-31 | 198 | 323 | 180 | + GNT-I family. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) EC:2.4.1.101 transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localised to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C-terminus. | ||
| pfam07173 | DUF1399 | 8.0e-38 | 114 | 198 | 85 | + Protein of unknown function (DUF1399). This family represents a conserved region approximately 150 residues long within a number of hypothetical plant proteins of unknown function. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000139 | Golgi membrane |
| GO:0003827 | alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity |
| GO:0006487 | protein N-linked glycosylation |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001031396.1 | 1.4013e-45 | 107 | 209 | 152 | 252 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_179851.2 | 0 | 89 | 209 | 79 | 252 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_195503.1 | 0 | 89 | 209 | 79 | 250 | glycine-rich protein [Arabidopsis thaliana] |
| RefSeq | XP_002321500.1 | 1.96182e-44 | 85 | 207 | 74 | 247 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV160569 | 174 | 85 | 209 | 0 |
| EV161225 | 174 | 85 | 209 | 0 |
| EV161225 | 35 | 54 | 88 | 0.001 |
| EV161225 | 92 | 123 | 208 | 0.48 |
| EV160569 | 46 | 167 | 208 | 6.1 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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