| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 912689 |
| Family | AA6 |
| Protein Properties | Length: 276 Molecular Weight: 28908.7 Isoelectric Point: 5.1195 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA6 | 76 | 270 | 0 |
| KIFVVFYSMYGHVESLAKRMKKGVDSVQGVEATLYRVPETLSQEVVEQMKAPVKDLEIPEITAAELAAADGFLFGFPTRYGCMAAQMKAFFDSTGSLWKE QSLAGKPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAGDGSREATETELALAEHQGNYMAAIVK | |||
| Full Sequence |
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| Protein Sequence Length: 276 Download |
| MGKGGGCVPS KKKKPSSLAT TGDGPGIDDD NDATIAPIQI DDDQTTIDGD RTTATNTAGT 60 TTPAISTAAK ISSPLKIFVV FYSMYGHVES LAKRMKKGVD SVQGVEATLY RVPETLSQEV 120 VEQMKAPVKD LEIPEITAAE LAAADGFLFG FPTRYGCMAA QMKAFFDSTG SLWKEQSLAG 180 KPAGFFVSTG TQGGGQETTA WTAITQLVHH GMLFVPIGYT FGAGMFKMDS IRGGSPYGAG 240 VFAGDGSREA TETELALAEH QGNYMAAIVK RLAQP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00258 | Flavodoxin_1 | 1.0e-8 | 79 | 211 | 145 | + Flavodoxin. | ||
| pfam03358 | FMN_red | 1.0e-11 | 91 | 219 | 132 | + NADPH-dependent FMN reductase. | ||
| COG0655 | WrbA | 9.0e-29 | 75 | 272 | 205 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 6.0e-51 | 76 | 272 | 198 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 9.0e-61 | 76 | 273 | 199 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64959.1 | 0 | 1 | 275 | 1 | 273 | minor allergen [Arabidopsis thaliana] |
| RefSeq | NP_195393.1 | 0 | 1 | 275 | 1 | 273 | quinone reductase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002310794.1 | 0 | 1 | 274 | 1 | 253 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002327699.1 | 0 | 1 | 274 | 1 | 252 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525103.1 | 0 | 1 | 274 | 1 | 256 | Minor allergen Alt a, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3b6m_B | 0 | 76 | 272 | 3 | 196 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3b6m_A | 0 | 76 | 272 | 3 | 196 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3b6k_B | 0 | 76 | 272 | 3 | 196 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3b6k_A | 0 | 76 | 272 | 3 | 196 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3b6j_B | 0 | 76 | 272 | 3 | 196 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EX102627 | 277 | 1 | 276 | 0 |
| EX109325 | 270 | 1 | 269 | 0 |
| CK121153 | 243 | 1 | 242 | 0 |
| EX131150 | 266 | 12 | 276 | 0 |
| EX110128 | 249 | 1 | 248 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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