| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 913024 |
| Family | CBM22 |
| Protein Properties | Length: 578 Molecular Weight: 65300 Isoelectric Point: 8.9787 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM22 | 46 | 162 | 7.7e-23 |
| IIVNPDLRDGGSLGWTPFGNAKVDFRKIGNHNFVVARDRKQPYDSVSQKVYLEKGLLYTFSAWLQVSKGKAPVKAVFKKNGEYKHAGSVVAESKCWSMLK GGLTVDESGPAQLYFES | |||
| GH10 | 223 | 481 | 0 |
| KLGFPFGCEVEKNILGNKAYQNWFTQRFTVTTFANEMKWYSTEVVRGKEDYSTADAMLRFFKQHGVAVRGHNILWNDPKYQPGWVNSLSGNDLYNAVKRR VFSVVSRYKGQLAGWDVVNENLHFSYFEDKMGPKASYNIFKMAQAFDPTTTKFMNEYNTLEESRDSDSSPARYLQKLRELRSIRVCGNISLGIGLESHFK TPNIPYMRSALDTLAATGLPIWLTEVDVEAPPNVQAKYFERVLREGHAHPQVKGIVTWS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 578 Download |
| MKRLLLLVVL CSLSLSRCES KVVPYDYSAT IECLEIPLKP QYNGGIIVNP DLRDGGSLGW 60 TPFGNAKVDF RKIGNHNFVV ARDRKQPYDS VSQKVYLEKG LLYTFSAWLQ VSKGKAPVKA 120 VFKKNGEYKH AGSVVAESKC WSMLKGGLTV DESGPAQLYF ESEDTTVEIW VDSVSLQPFT 180 QEEWNSHHEQ SIQKERKRTV KIRAVNSKGQ PIPKATISIE QRKLGFPFGC EVEKNILGNK 240 AYQNWFTQRF TVTTFANEMK WYSTEVVRGK EDYSTADAML RFFKQHGVAV RGHNILWNDP 300 KYQPGWVNSL SGNDLYNAVK RRVFSVVSRY KGQLAGWDVV NENLHFSYFE DKMGPKASYN 360 IFKMAQAFDP TTTKFMNEYN TLEESRDSDS SPARYLQKLR ELRSIRVCGN ISLGIGLESH 420 FKTPNIPYMR SALDTLAATG LPIWLTEVDV EAPPNVQAKY FERVLREGHA HPQVKGIVTW 480 SGYSPSGCYR MCLTDGNFKN LPTGDVVDKL LHEWGGFRRQ TTGVTDADGY FEASLFHGDY 540 DLKIDHPLTN SKASHSFKLT SDVSSSETQA SSFVFRV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 7.0e-8 | 44 | 165 | 132 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 6.0e-31 | 250 | 484 | 257 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 3.0e-48 | 226 | 480 | 273 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 3.0e-84 | 259 | 507 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA19866.1 | 0 | 26 | 577 | 119 | 669 | putative protein [Arabidopsis thaliana] |
| EMBL | CAA19866.1 | 0 | 399 | 506 | 2 | 109 | putative protein [Arabidopsis thaliana] |
| EMBL | CAA19868.1 | 0 | 37 | 577 | 22 | 574 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_195110.3 | 0 | 16 | 577 | 16 | 576 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | NP_195112.2 | 0 | 1 | 577 | 1 | 576 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 3e-31 | 228 | 507 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g4f_B | 6e-27 | 213 | 480 | 1 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g4f_A | 6e-27 | 213 | 480 | 1 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g3j_A | 6e-27 | 213 | 480 | 1 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g3i_A | 6e-27 | 213 | 480 | 1 | 266 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
