Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 918184 |
Family | CE8 |
Protein Properties | Length: 224 Molecular Weight: 24903.9 Isoelectric Point: 10.5763 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 8 | 207 | 0 |
TAGPAKGHAVALRSSSDLSVFYRCSIEGYQDTLMVHSQRQFYRECYIYGSVDFIFGNAAVVFQNCLILPRRPLKGQANVIIAQGRTDLIQNKGISIHNSI IIPAPDLKPVVRSVKTYMGRPWMKYSRTVVLKTYIDSVVSAVGWSSWTKGSTYGLNTLFYAKYKNIGPASSTRWRVRWKGFHVLSKASDVSAFTVGKFIA |
Full Sequence |
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Protein Sequence Length: 224 Download |
MRIYRSGTAG PAKGHAVALR SSSDLSVFYR CSIEGYQDTL MVHSQRQFYR ECYIYGSVDF 60 IFGNAAVVFQ NCLILPRRPL KGQANVIIAQ GRTDLIQNKG ISIHNSIIIP APDLKPVVRS 120 VKTYMGRPWM KYSRTVVLKT YIDSVVSAVG WSSWTKGSTY GLNTLFYAKY KNIGPASSTR 180 WRVRWKGFHV LSKASDVSAF TVGKFIAGTA WLPSTGIPFT LEL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02916 | PLN02916 | 2.0e-93 | 8 | 220 | 213 | + pectinesterase family protein | ||
PLN02468 | PLN02468 | 2.0e-93 | 8 | 219 | 212 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 6.0e-105 | 8 | 220 | 213 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-114 | 8 | 208 | 201 | + Pectinesterase. | ||
PLN02995 | PLN02995 | 1.0e-148 | 8 | 223 | 216 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24581.1 | 0 | 8 | 223 | 41 | 255 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199962.1 | 0 | 8 | 223 | 321 | 536 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199963.1 | 0 | 8 | 223 | 325 | 540 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002318284.1 | 0 | 7 | 223 | 311 | 527 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510939.1 | 0 | 8 | 219 | 312 | 522 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 8 | 223 | 106 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 8 | 219 | 102 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.000000000000004 | 15 | 129 | 129 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.000000000000004 | 15 | 129 | 129 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.000000000000004 | 15 | 129 | 129 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GT128444 | 217 | 8 | 224 | 0 |
CV273451 | 219 | 6 | 224 | 0 |
CX711539 | 213 | 8 | 220 | 0 |
CD829932 | 183 | 42 | 224 | 0 |
BQ519071 | 217 | 8 | 224 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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