| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 918586 |
| Family | GH1 |
| Protein Properties | Length: 259 Molecular Weight: 29669.6 Isoelectric Point: 6.1636 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH1 | 70 | 256 | 0 |
| PDGTGEVNPDGVKYYNSLIDALLAKRIKPYVTLYHWDLPQALEDRYEGWLSREVVDDFERYAFTCFKAFGDRVKYWITFNEPHGVSIQGYDTGIQAPGRC SLLGHWFCKEGKSSVEPYVVAHNILLSHAAAYHTYQRNFKNKMWEIFICKEKQRGQIGISLNAKWYEPMSDCDEDNDAARRAMDFGI | |||
| Full Sequence |
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| Protein Sequence Length: 259 Download |
| MESLMRLVLV LFPFLVVFFV PLDHVSSESI SRADFPDGFV FGTASSAYQN ISSKELYKGE 60 SIWDTFTKKP DGTGEVNPDG VKYYNSLIDA LLAKRIKPYV TLYHWDLPQA LEDRYEGWLS 120 REVVDDFERY AFTCFKAFGD RVKYWITFNE PHGVSIQGYD TGIQAPGRCS LLGHWFCKEG 180 KSSVEPYVVA HNILLSHAAA YHTYQRNFKN KMWEIFICKE KQRGQIGISL NAKWYEPMSD 240 CDEDNDAARR AMDFGIGR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2723 | BglB | 3.0e-56 | 35 | 254 | 269 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN02998 | PLN02998 | 9.0e-57 | 25 | 257 | 277 | + beta-glucosidase | ||
| PLN02849 | PLN02849 | 1.0e-57 | 27 | 257 | 273 | + beta-glucosidase | ||
| TIGR03356 | BGL | 3.0e-58 | 36 | 254 | 266 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 3.0e-72 | 35 | 254 | 268 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB09336.1 | 0 | 23 | 257 | 19 | 291 | beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CBI20471.1 | 0 | 9 | 256 | 75 | 358 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200268.3 | 0 | 1 | 257 | 1 | 294 | BGLU41 (BETA GLUCOSIDASE 41); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002280323.1 | 0 | 14 | 256 | 4 | 282 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002530914.1 | 0 | 14 | 257 | 5 | 278 | beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 26 | 257 | 8 | 275 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3gnp_A | 0 | 26 | 257 | 8 | 275 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3gno_A | 0 | 26 | 257 | 8 | 275 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2jf7_B | 0 | 15 | 257 | 9 | 299 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2jf7_A | 0 | 15 | 257 | 9 | 299 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
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| Start | End | ||||
| 7 | 26 | ||||
| Signal Peptide | |||||
|---|---|---|---|---|---|
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| Cleavage Site | |||||
| 27 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CK277037 | 279 | 25 | 257 | 0 |
| EX041730 | 171 | 87 | 257 | 0 |
| EL452495 | 277 | 27 | 257 | 0 |
| EL454504 | 277 | 27 | 257 | 0 |
| DY960855 | 279 | 25 | 257 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Carica papaya | evm.model.supercontig_80.123 | ||||
| Manihot esculenta | cassava4.1_023739m | ||||
| Oryza sativa | LOC_Os06g46940.1 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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