| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 919046 |
| Family | CBM43 |
| Protein Properties | Length: 481 Molecular Weight: 52683.8 Isoelectric Point: 8.5537 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 365 | 444 | 2e-22 |
| WCVVNNNKDLSNASARALEACAVADCTSILPGGSCSGIRWPGNVSYAFNSLYQQNDHSAESCNFGGLGLITTVDPSEDNC | |||
| GH17 | 27 | 345 | 0 |
| GVNWGTEASHPLPPSKVVELLKSNGIAKVKLFDADPKVLRALSGSNIGVTVGIQNSMLKSLNASVKVAESWVHDNVTRYFNGGNRVRIEYVAVGDEPFLQ SYGNQYRPFVIGAAMNIQNALAKASLANVVKVVVPSSFDSFLSESGRPSSGHFRADLNKTMIELLSFLTKHHSPFFVTISPFLSFHQNKNISLDFSLFKQ TAQAHKDGRKTYRNSFDLSYDILVSALSTIGFSEVDIVVSKIGWPTDGAANATSPTAETFFKGLMGHLEKKTGSLPRPPVETYIESLLDEDQRNLSSGNF ERHWGVFTFDGQAKYNFNF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 481 Download |
| MARRLFLLLL AVTVELSLSG TIVVAFGVNW GTEASHPLPP SKVVELLKSN GIAKVKLFDA 60 DPKVLRALSG SNIGVTVGIQ NSMLKSLNAS VKVAESWVHD NVTRYFNGGN RVRIEYVAVG 120 DEPFLQSYGN QYRPFVIGAA MNIQNALAKA SLANVVKVVV PSSFDSFLSE SGRPSSGHFR 180 ADLNKTMIEL LSFLTKHHSP FFVTISPFLS FHQNKNISLD FSLFKQTAQA HKDGRKTYRN 240 SFDLSYDILV SALSTIGFSE VDIVVSKIGW PTDGAANATS PTAETFFKGL MGHLEKKTGS 300 LPRPPVETYI ESLLDEDQRN LSSGNFERHW GVFTFDGQAK YNFNFSHNPK KVGNAQNVQY 360 LPPKWCVVNN NKDLSNASAR ALEACAVADC TSILPGGSCS GIRWPGNVSY AFNSLYQQND 420 HSAESCNFGG LGLITTVDPS EDNCRFSIQL DTSHSASQIP TFFQRWPLLI VPTVWTLLKL 480 * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.002 | 259 | 336 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 8.0e-14 | 364 | 432 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-29 | 364 | 446 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-70 | 27 | 345 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95444.1 | 0 | 27 | 478 | 36 | 488 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| EMBL | CBI28434.1 | 0 | 21 | 478 | 18 | 481 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200656.2 | 0 | 1 | 467 | 1 | 465 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002269108.1 | 0 | 15 | 474 | 15 | 480 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313970.1 | 0 | 19 | 478 | 15 | 476 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 27 | 346 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_C | 0 | 27 | 346 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_B | 0 | 27 | 346 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_A | 0 | 27 | 346 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3em5_D | 0 | 27 | 346 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
