| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 919149 |
| Family | GT4 |
| Protein Properties | Length: 510 Molecular Weight: 57096.1 Isoelectric Point: 8.9051 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 315 | 463 | 4.2e-22 |
| KKPPLVLGIAGRLVRDKGHPLMFAALKRVFEESKEARENVVVLVAGDGPWGNRYRDLGSNNVIVLGPLDQERLAEFYNAIDVFVNPTLRAQGLDHTLLEA MVSGKPVLATRLASITGSVVVGPHLGYTFSPNVESLSEAISRVVSDGTE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 510 Download |
| MARENQLMSF SFSFRYLCHF ALLLSLLSFV SFLFRHNTSL CSCLYDHNPK ANTFDHYHHN 60 NETIDLLRFS SAWNHLTFPS KPKKTLKIAV VVKKWPRKSQ AGGLERHALT LHLALANRGH 120 EVHVFTAASP SFPEYQLKNL LFHLSEPTAA GYLDQASVSL QLQTQNASGR PFDVIHTESV 180 GLLHTRAKNL RNVVASWHGI AYETFHSDII QELLRQADIA AAAAAGTEEE QPPPSSPALT 240 ERAKRVVEEV KFFQRYAHHV ATSDHCGDVL KRIYMIPEER VHIILNGVDE NVFKPDVSKR 300 ESFREKYGVR SGKNKKPPLV LGIAGRLVRD KGHPLMFAAL KRVFEESKEA RENVVVLVAG 360 DGPWGNRYRD LGSNNVIVLG PLDQERLAEF YNAIDVFVNP TLRAQGLDHT LLEAMVSGKP 420 VLATRLASIT GSVVVGPHLG YTFSPNVESL SEAISRVVSD GTEELQRKGK EARERSLRLF 480 TANKMADSYE RFFLCISDQS FCTLQASNI* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03808 | GT1_cap1E_like | 3.0e-31 | 87 | 491 | 429 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
| cd03807 | GT1_WbnK_like | 8.0e-34 | 251 | 493 | 250 | + This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. | ||
| cd03795 | GT1_like_4 | 2.0e-34 | 102 | 486 | 405 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. | ||
| cd03798 | GT1_wlbH_like | 7.0e-42 | 102 | 493 | 414 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03801 | GT1_YqgM_like | 3.0e-59 | 87 | 493 | 420 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB10782.1 | 0 | 1 | 506 | 1 | 521 | glycosyl transferase-like [Arabidopsis thaliana] |
| EMBL | CBI16041.1 | 0 | 12 | 507 | 131 | 608 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200715.2 | 0 | 1 | 506 | 1 | 505 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | XP_002280256.1 | 0 | 1 | 507 | 1 | 486 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313414.1 | 0 | 72 | 498 | 1 | 411 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3mbo_H | 0.000001 | 83 | 493 | 31 | 402 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3mbo_G | 0.000001 | 83 | 493 | 31 | 402 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3mbo_F | 0.000001 | 83 | 493 | 31 | 402 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3mbo_E | 0.000001 | 83 | 493 | 31 | 402 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3mbo_D | 0.000001 | 83 | 493 | 31 | 402 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
