Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 919677 |
Family | GH35 |
Protein Properties | Length: 741 Molecular Weight: 83208.7 Isoelectric Point: 8.5686 |
Chromosome | Chromosome/Scaffold: 1 Start: 3535525 End: 3535979 |
Description | Plant self-incompatibility protein S1 family |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 341 | 0 |
IGNRRQLIISAAIHYPRSVPAMWPSLVQTAKEGGCNAIESYVFWNGHEPSPRKYYFGGRYNIVKFIKIVQQAGMHMILRIGPFVAAEWNYGGVPVWLHYV PGTVFRADNEPWKHYMESFTTYIVNLLKKEKLFAPQGGPIILSQVENEYGYYEKDYGEGGKRYAQWSASMAVSQNIGVPWMMCQQWDAPPTVISTCNGFY CDQFTPNTPDKPKIWTENWPGWFKTFGGRDPHRPAEDVAYSVARFFGKGGSVHNYYMYHGGTNFGRTSGGPFITTSYDYEAPIDEYGLPRLPKWGHLKDL HK |
Full Sequence |
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Protein Sequence Length: 741 Download |
MNRVTESIAS TAILVGLVFL FSWRSIDAAN VSYDHRSLSI GNRRQLIISA AIHYPRSVPA 60 MWPSLVQTAK EGGCNAIESY VFWNGHEPSP RKYYFGGRYN IVKFIKIVQQ AGMHMILRIG 120 PFVAAEWNYG GVPVWLHYVP GTVFRADNEP WKHYMESFTT YIVNLLKKEK LFAPQGGPII 180 LSQVENEYGY YEKDYGEGGK RYAQWSASMA VSQNIGVPWM MCQQWDAPPT VISTCNGFYC 240 DQFTPNTPDK PKIWTENWPG WFKTFGGRDP HRPAEDVAYS VARFFGKGGS VHNYYMYHGG 300 TNFGRTSGGP FITTSYDYEA PIDEYGLPRL PKWGHLKDLH KAIMLSENLL INGEHQNFTL 360 GHSLEADVYT DSSGTCAAFL SNLDDKNDKT VMFRNTSYHL PAWSVSILPD CKNEVFNTAK 420 VTSKFSKVEM LPEDLRSSSG LKWEVFSEKP GIWGEADFVK NELVDHINTT KDTTDYLWYT 480 TSITVSTNEE FLKKGSPPVL FIESKGHTLH VFINKEYLGT ATGNGTHVPF KLKKSVALKA 540 GENNIDLLSM TVGLSNAGSF YEWVGAGLTS VSIKGFNKGT LNLTNSKWSY KLGVQGVHLE 600 LFKPGDSGAV KWTVTTKPPK KQPLTWYKVV IDPPSGSEPV GLDMMSMGKG MAWLNGEEIG 660 RYWPRIARKS TPNDECVKEC DYRGKFMPDK CLTGCGEPSQ RWYHVPRSWF KSSGNELVIF 720 EEKGGDPMKI TLSKRKVSVV * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 3.0e-15 | 31 | 333 | 347 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 8.0e-144 | 37 | 343 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 13 | 740 | 730 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91080.1 | 0 | 30 | 740 | 28 | 742 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAB64746.1 | 0 | 1 | 740 | 1 | 741 | putative beta-galactosidase [Arabidopsis thaliana] |
EMBL | CBI21600.1 | 0 | 28 | 740 | 20 | 737 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_201186.1 | 0 | 1 | 740 | 1 | 741 | BGAL10 (beta-galactosidase 10); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002310540.1 | 0 | 13 | 740 | 1 | 717 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1e-38 | 46 | 339 | 23 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9e-32 | 48 | 326 | 28 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9e-32 | 48 | 326 | 28 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 9e-32 | 48 | 326 | 28 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |