| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 919784 |
| Family | CE8 |
| Protein Properties | Length: 603 Molecular Weight: 65462.7 Isoelectric Point: 5.955 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 289 | 593 | 0 |
| VTVCENGGKACNYKTVQEAVDAAPDTNGTVKFVIRIKEGVYEETVRVPFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTFNSATVGVLGDGFMARDLTIE NTAGADAHQAVAFRSDSDFSILENCEFLGNQDTVYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGF VFLNCSINGTEEYMKEFQANPKAHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWSGDFALKTLYYGEYKNKGPGSVRTNRVPWSSEIPEKHVDVYSV ANFIQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 603 Download |
| MDSPKLPYSL SASSSTPFAS AAVKPHRNKL LSRNGILIII AVSCILLLLI SLLIYATVSK 60 SSRSHRNPSH QTPTSDDQPP PETPPSPPPI AQIRLACNAT RFPDHCVASL SKPGQVPPDP 120 KPVQIIHSAI SVSFENLKSG QSKIKSILDS SAGNQNRTNI ATICLEILSY SQHRTESTDI 180 AVTSGEIKDA RAWMSAALAY QFDCWSGLKT VNDTKQVVDT ITFFEDLVNL TGNALSMMLS 240 FDNFGDDVVS WIRPATERDG FWEKAGPSLG SGTGTEANLG FPSGLTEDVT VCENGGKACN 300 YKTVQEAVDA APDTNGTVKF VIRIKEGVYE ETVRVPFEKK NVVFIGDGMG KTVITGSLNV 360 GQPGMTTFNS ATVGVLGDGF MARDLTIENT AGADAHQAVA FRSDSDFSIL ENCEFLGNQD 420 TVYAHSLRQF YKQCRIQGNV DFIFGNSAAV FQDCDILIAS KHSKLEQGGA NNAITAHGRI 480 DASQSTGFVF LNCSINGTEE YMKEFQANPK AHKNFLGRPW KEFSRTVFVN CNLESLISPD 540 GWMPWSGDFA LKTLYYGEYK NKGPGSVRTN RVPWSSEIPE KHVDVYSVAN FIQADEWAST 600 TA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 8.0e-102 | 93 | 601 | 535 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 5.0e-109 | 123 | 601 | 491 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 4.0e-109 | 96 | 602 | 554 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-153 | 288 | 595 | 311 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 91 | 602 | 512 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM91523.1 | 0 | 194 | 602 | 1 | 409 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| DDBJ | BAB09534.1 | 0 | 85 | 602 | 63 | 577 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_196538.1 | 0 | 85 | 602 | 37 | 551 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_568991.2 | 0 | 1 | 602 | 1 | 602 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002281640.1 | 0 | 42 | 602 | 1 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 288 | 574 | 8 | 281 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 300 | 602 | 14 | 308 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-21 | 286 | 567 | 3 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-21 | 286 | 567 | 3 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-21 | 286 | 567 | 3 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
