Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 920857 |
Family | CE8 |
Protein Properties | Length: 208 Molecular Weight: 23064.6 Isoelectric Point: 10.7108 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 7 | 67 | 3e-23 |
VEGLHFIAKGIAFRNTAGPAKGQAVALRSSSHLSVFHRCSIEGDQDTLMVHSQRQFYRECQ | |||
CE8 | 68 | 191 | 4.6e-32 |
ANVITAQGRTDLIQNTGISIHNSIIIPAHDLKLVVRSVKTYMGRPWMKYSRTVVLKTYIDSVVNAVGWSPWTKGSTYGLNTLFYAKYKNIGPASSTRWRV RWKGFHVLSKASDVSAFTVGKFIA |
Full Sequence |
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Protein Sequence Length: 208 Download |
MRIYAPVEGL HFIAKGIAFR NTAGPAKGQA VALRSSSHLS VFHRCSIEGD QDTLMVHSQR 60 QFYRECQANV ITAQGRTDLI QNTGISIHNS IIIPAHDLKL VVRSVKTYMG RPWMKYSRTV 120 VLKTYIDSVV NAVGWSPWTK GSTYGLNTLF YAKYKNIGPA SSTRWRVRWK GFHVLSKASD 180 VSAFTVGKFI AGTAWLPSTG IPFTLEL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02916 | PLN02916 | 3.0e-71 | 7 | 204 | 228 | + pectinesterase family protein | ||
PLN02468 | PLN02468 | 6.0e-72 | 7 | 203 | 227 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 3.0e-84 | 7 | 204 | 228 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-92 | 7 | 192 | 216 | + Pectinesterase. | ||
PLN02995 | PLN02995 | 6.0e-127 | 5 | 207 | 233 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24581.1 | 0 | 5 | 207 | 24 | 255 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199962.1 | 0 | 5 | 207 | 304 | 536 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199963.1 | 0 | 5 | 207 | 308 | 540 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002318284.1 | 0 | 5 | 207 | 295 | 527 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510939.1 | 0 | 5 | 203 | 295 | 522 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 9 | 207 | 93 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 9 | 203 | 89 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CV273451 | 225 | 14 | 208 | 0 |
CX711539 | 230 | 5 | 204 | 0 |
JK801707 | 225 | 13 | 208 | 0 |
GT128444 | 218 | 21 | 208 | 0 |
EL463457 | 231 | 7 | 208 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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