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Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 92752 |
Family | GT47 |
Protein Properties | Length: 353 Molecular Weight: 40790.4 Isoelectric Point: 9.3791 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 23 | 306 | 0 |
RVFRIFVYKDGYKPLMHEGPKTGIYASEGLFIATMERGNPFAVTEPKIATMFFIPFSLKQMVDYMYDTNSHSMKNIQSYIAGYLRRLASKYPYMNATNGI DHFFVSCHDWALMALEKQDCQRNIVKVVCNADSSRGFNTSRDVSLPETRVRQGKHSPIIRDISGMDRPYLAFFAGQMHGKLRPVLLAHWKDKDPEMKIYE VLPPSVAERISYSEHMRLSKYCICAAGFEVNSPRLVEAIVNECVPVILADNFVLPFSEVINWDSISVTVAEKDVANLKAILAGI |
Full Sequence |
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Protein Sequence Length: 353 Download |
MIYRSNVIFL YLFYSRSYEA MQRVFRIFVY KDGYKPLMHE GPKTGIYASE GLFIATMERG 60 NPFAVTEPKI ATMFFIPFSL KQMVDYMYDT NSHSMKNIQS YIAGYLRRLA SKYPYMNATN 120 GIDHFFVSCH DWALMALEKQ DCQRNIVKVV CNADSSRGFN TSRDVSLPET RVRQGKHSPI 180 IRDISGMDRP YLAFFAGQMH GKLRPVLLAH WKDKDPEMKI YEVLPPSVAE RISYSEHMRL 240 SKYCICAAGF EVNSPRLVEA IVNECVPVIL ADNFVLPFSE VINWDSISVT VAEKDVANLK 300 AILAGIPLRR YKEMQARLKH VKRHFVWKNS PEKYDIFNMI VHSLWTQQLN NV* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-55 | 21 | 306 | 305 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001769276.1 | 0 | 11 | 350 | 51 | 394 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781687.1 | 0 | 16 | 352 | 24 | 363 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001783154.1 | 0 | 21 | 350 | 1 | 334 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002283936.1 | 0 | 14 | 352 | 70 | 407 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303362.1 | 0 | 14 | 352 | 39 | 381 | predicted protein [Populus trichocarpa] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BX834842 | 333 | 24 | 350 | 0 |
GT051299 | 333 | 14 | 341 | 0 |
DR166069 | 246 | 110 | 352 | 0 |
ES808098 | 315 | 14 | 325 | 0 |
EG631332 | 275 | 82 | 352 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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