| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 93746 |
| Family | PL1 |
| Protein Properties | Length: 365 Molecular Weight: 40526.9 Isoelectric Point: 8.0095 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| PL1 | 88 | 263 | 0 |
| LSGNISVSSAIRVASRKTLDGRGQRIKITGHGIQLKKCEHIIICNLEFQGGRGHDVDGIQIKPNTEKVWIDRCSLSDYDDGLIDITRQSTDITVSRCHFH HHDKTMLISADAKHIEDRNMRITIHHCFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQICSQGNVYQA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 365 Download |
| MNRLRKCCCP GIEIHHGTPD PAPSVPGPYA NVDSRLRALA RAAQGFGSAS IGGLEGAVYH 60 VTTLADDGPG SLRYGCRQEQ PLWIVFDLSG NISVSSAIRV ASRKTLDGRG QRIKITGHGI 120 QLKKCEHIII CNLEFQGGRG HDVDGIQIKP NTEKVWIDRC SLSDYDDGLI DITRQSTDIT 180 VSRCHFHHHD KTMLISADAK HIEDRNMRIT IHHCFFDGTR QRHPRVRFAK VHLYNNYTRN 240 WGIYAVCASV ESQICSQGNV YQAGSKKKVF EYYTEKASIY RKEFTAFTTV SLQALDKNEA 300 ECGCVCSSGD VFLGGAQWEA RNPHQVFRPE SCYSNCTIEA AGPELVDKVC KIAGWQNVAL 360 PPDW* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00544 | Pec_lyase_C | 9.0e-40 | 80 | 261 | 202 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| COG3866 | PelB | 2.0e-41 | 44 | 270 | 253 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| smart00656 | Amb_all | 2.0e-62 | 87 | 265 | 191 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABR16354.1 | 0 | 29 | 363 | 64 | 381 | unknown [Picea sitchensis] |
| EMBL | CBI32661.1 | 0 | 28 | 363 | 5 | 324 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_001759359.1 | 0 | 27 | 363 | 4 | 323 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002277576.1 | 0 | 28 | 363 | 49 | 368 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311134.1 | 0 | 28 | 361 | 5 | 324 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 9.80909e-45 | 30 | 285 | 12 | 280 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 9.80909e-45 | 30 | 285 | 12 | 280 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 3zsc_A | 1e-23 | 48 | 263 | 19 | 248 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1vbl_A | 2e-21 | 98 | 261 | 128 | 330 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 3vmw_A | 2e-19 | 108 | 261 | 85 | 246 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DY978143 | 300 | 18 | 317 | 0 |
| JG177860 | 321 | 44 | 361 | 0 |
| DY275282 | 342 | 25 | 363 | 0 |
| DY277275 | 327 | 28 | 351 | 0 |
| GT019596 | 251 | 28 | 278 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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