Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 94863 |
Family | CBM43 |
Protein Properties | Length: 484 Molecular Weight: 51476.2 Isoelectric Point: 6.6418 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 374 | 453 | 3.3e-30 |
WCIAKPNADDSVLLKGLNFACGEGSADCQAIQRGGGCYTPETLNSHASYAFNAYYQKHGRNFWNCYFAGVGMLSITDPSK | |||
GH17 | 17 | 335 | 0 |
VGVNYGTLGNNLPSPDQVAHLVNSSTSITRIKLYDADASVLHAFAGSGVSIVVGIPNEQLESLGSNPTAAAIWVKQHIVAFLPHTNIIAIAAGNEALTIA NGSFSSFLMPCINNVYAALASLGLHDRIKISTPHSFAVLAMSYPPSSGTFRPSFLQVIIPLLQFLSKTGSPLMINAYPYFAYHNDPAHVSLNYALLRPGN VIVDPRTKLRYTNLLDAQLDATYAAMQALGVHDVAVTISETGWPSRGASDEPAANLTNARAYVSNLVDYVASGVGTPARPNASVDVFIFALFNENEKPGS VSEQYYGLFTSDGTAVYDI |
Full Sequence |
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Protein Sequence Length: 484 Download |
MDGVLSVGRS VDATSVVGVN YGTLGNNLPS PDQVAHLVNS STSITRIKLY DADASVLHAF 60 AGSGVSIVVG IPNEQLESLG SNPTAAAIWV KQHIVAFLPH TNIIAIAAGN EALTIANGSF 120 SSFLMPCINN VYAALASLGL HDRIKISTPH SFAVLAMSYP PSSGTFRPSF LQVIIPLLQF 180 LSKTGSPLMI NAYPYFAYHN DPAHVSLNYA LLRPGNVIVD PRTKLRYTNL LDAQLDATYA 240 AMQALGVHDV AVTISETGWP SRGASDEPAA NLTNARAYVS NLVDYVASGV GTPARPNASV 300 DVFIFALFNE NEKPGSVSEQ YYGLFTSDGT AVYDIGLLKS PSSPGPSSSP SSPSPSSSPS 360 SPPPPPRSTN RHIWCIAKPN ADDSVLLKGL NFACGEGSAD CQAIQRGGGC YTPETLNSHA 420 SYAFNAYYQK HGRNFWNCYF AGVGMLSITD PSKFLIDVLQ VDLLIRVESR RLWSLQVPGY 480 VMI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0001 | 252 | 328 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-21 | 374 | 445 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-35 | 374 | 452 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-104 | 17 | 335 | 319 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24319.1 | 0 | 8 | 452 | 30 | 482 | unknown [Picea sitchensis] |
GenBank | ABK24695.1 | 0 | 17 | 452 | 27 | 476 | unknown [Picea sitchensis] |
GenBank | ABK25242.1 | 0 | 8 | 452 | 30 | 482 | unknown [Picea sitchensis] |
RefSeq | XP_001761806.1 | 0 | 17 | 455 | 34 | 454 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001772420.1 | 0 | 10 | 452 | 31 | 509 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 17 | 335 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 17 | 337 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 17 | 337 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 17 | 337 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 17 | 337 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE426761 | 269 | 111 | 379 | 0 |
FE446867 | 223 | 220 | 441 | 0 |
HO782823 | 431 | 24 | 452 | 0 |
FE426760 | 189 | 264 | 452 | 0 |
HO781349 | 412 | 41 | 452 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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