Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 96745 |
Family | CBM43 |
Protein Properties | Length: 460 Molecular Weight: 50412.4 Isoelectric Point: 8.3531 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 356 | 436 | 5.7e-30 |
WCVAKADYVSTADVQDAIDYACGGGKADCAAIQPGQACYLPNLVRLHASYAFNSYWQKMKRSGGTCAFNGFAKLTSVDPSK | |||
GH17 | 1 | 326 | 0 |
IGINYGRVADNLPPPARVVELLQSLKIRSVKIYDANPDVLKALQSTNLRVAIMVTNQEIEQMAASSNFSDQWVQQNVAAYPATKIETAIVGNEILSDLSL RQTVWSKLVPAMENLHSSLQRLGHGKIKVTTSLAIDCLKVSFPPSEGAFRDDVSDTIIQPMLKFLETTQSPFFINVYPYFAWLDDQLTISLDYALFRGPS SNASQAEDPSGMHYDNLLDAQLDALVVAMTKLGYGGVQVSISETGWPSRGSVGASLANAADYNRRLVLRILGKNRKNKNHGTPRRPGRLIDTYIFALFNE DQKPGAATERNWGLLYPNGSKVYDID |
Full Sequence |
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Protein Sequence Length: 460 Download |
IGINYGRVAD NLPPPARVVE LLQSLKIRSV KIYDANPDVL KALQSTNLRV AIMVTNQEIE 60 QMAASSNFSD QWVQQNVAAY PATKIETAIV GNEILSDLSL RQTVWSKLVP AMENLHSSLQ 120 RLGHGKIKVT TSLAIDCLKV SFPPSEGAFR DDVSDTIIQP MLKFLETTQS PFFINVYPYF 180 AWLDDQLTIS LDYALFRGPS SNASQAEDPS GMHYDNLLDA QLDALVVAMT KLGYGGVQVS 240 ISETGWPSRG SVGASLANAA DYNRRLVLRI LGKNRKNKNH GTPRRPGRLI DTYIFALFNE 300 DQKPGAATER NWGLLYPNGS KVYDIDLTGK TPVPALPQAA IPGNFSTGNS SRQGQWCVAK 360 ADYVSTADVQ DAIDYACGGG KADCAAIQPG QACYLPNLVR LHASYAFNSY WQKMKRSGGT 420 CAFNGFAKLT SVDPSKFRSF SLFLWFLFQC SLSFLLVCF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 235 | 318 | 90 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-21 | 355 | 427 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-35 | 355 | 434 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-98 | 1 | 326 | 328 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR16205.1 | 0 | 1 | 435 | 48 | 485 | unknown [Picea sitchensis] |
RefSeq | NP_001149815.1 | 0 | 1 | 436 | 33 | 467 | glucan endo-1,3-beta-glucosidase A6 [Zea mays] |
RefSeq | XP_002334812.1 | 0 | 1 | 435 | 27 | 454 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002444717.1 | 0 | 1 | 436 | 48 | 474 | hypothetical protein SORBIDRAFT_07g026540 [Sorghum bicolor] |
RefSeq | XP_002462618.1 | 0 | 1 | 436 | 37 | 471 | hypothetical protein SORBIDRAFT_02g029080 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 1 | 327 | 1 | 306 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1aq0_B | 0 | 1 | 327 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 1 | 327 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 1 | 327 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 1 | 328 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE430663 | 266 | 65 | 330 | 0 |
FE480457 | 263 | 71 | 333 | 0 |
FE490681 | 262 | 72 | 333 | 0 |
FE483085 | 255 | 73 | 327 | 0 |
FE473236 | 237 | 97 | 333 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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