| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | AC159612.1_FGT007 |
| Family | CBM43 |
| Protein Properties | Length: 453 Molecular Weight: 48036.2 Isoelectric Point: 7.8138 |
| Chromosome | Chromosome/Scaffold: 5 Start: 4582792 End: 4584392 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 337 | 418 | 6.5e-25 |
| WCVVNTNAGNMDKLADNINYACTFADCTALGYGSTCGGMDSNGNASYAFNAFFQVQNQKEEACGFQGLAVPTQTDPSTAACN | |||
| GH17 | 26 | 314 | 0 |
| RCRPKIVAQLLRDNGIKKVKLFDADQGNASARSPAPASSFAYRCARGLVPAVALDGATQPCRYVAVGNEPFLAAYNGTFDKVTFPALQNIQNALNEAGLG DTVKATVPLNADVYMSPKDNPVPSAGRWCKFPEAKTGAPFTVNHLPRSSPCSETTTSPVDFAFFDGGRRAAGWDPGSGVSYTNVFDANFDTLVAALKSVG HGDMPVVVGEVGWPTDGDKHATNAYAQRFYNGLLRRLAANAGTPARPNQYIEVYLFGLLDEDVKSVAPGNFERHWGILRYDGQPKYPMD | |||
| Full Sequence |
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| Protein Sequence Length: 453 Download |
| MAGGRVGALA GGCAGDELGA RRPRTRCRPK IVAQLLRDNG IKKVKLFDAD QGNASARSPA 60 PASSFAYRCA RGLVPAVALD GATQPCRYVA VGNEPFLAAY NGTFDKVTFP ALQNIQNALN 120 EAGLGDTVKA TVPLNADVYM SPKDNPVPSA GRWCKFPEAK TGAPFTVNHL PRSSPCSETT 180 TSPVDFAFFD GGRRAAGWDP GSGVSYTNVF DANFDTLVAA LKSVGHGDMP VVVGEVGWPT 240 DGDKHATNAY AQRFYNGLLR RLAANAGTPA RPNQYIEVYL FGLLDEDVKS VAPGNFERHW 300 GILRYDGQPK YPMDLSGQGQ NAMLVPARGV EYLPRTWCVV NTNAGNMDKL ADNINYACTF 360 ADCTALGYGS TCGGMDSNGN ASYAFNAFFQ VQNQKEEACG FQGLAVPTQT DPSTAACNFT 420 IQIATTSAGH RRPLGVGVLA FALAQLVLLL LH* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 221 | 306 | 90 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-17 | 336 | 406 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-29 | 336 | 419 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-36 | 32 | 314 | 317 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF13440.2 | 0 | 86 | 432 | 28 | 380 | Os03g0792800 [Oryza sativa Japonica Group] |
| RefSeq | NP_001051526.1 | 0 | 29 | 432 | 48 | 472 | Os03g0792800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001058984.1 | 0 | 29 | 423 | 39 | 451 | Os07g0168600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002459388.1 | 0 | 29 | 428 | 43 | 464 | hypothetical protein SORBIDRAFT_02g003910 [Sorghum bicolor] |
| RefSeq | XP_002463758.1 | 0 | 29 | 432 | 45 | 473 | hypothetical protein SORBIDRAFT_01g005610 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 4e-28 | 32 | 316 | 20 | 315 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 3ur8_A | 4e-28 | 32 | 316 | 20 | 315 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 3ur7_B | 4e-28 | 32 | 316 | 20 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 4e-28 | 32 | 316 | 20 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 3e-27 | 32 | 316 | 20 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DR959669 | 272 | 159 | 430 | 0 |
| DT942796 | 272 | 159 | 430 | 0 |
| EE178322 | 248 | 183 | 430 | 0 |
| DV520541 | 247 | 184 | 430 | 0 |
| EC883323 | 234 | 199 | 432 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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