Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT1G02800.1 |
Family | GH9 |
Protein Properties | Length: 502 Molecular Weight: 55418.7 Isoelectric Point: 8.0622 |
Chromosome | Chromosome/Scaffold: 1 Start: 613216 End: 616191 |
Description | endoglucanase, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 43 | 496 | 0 |
NYKDALSKSILFFEGQRSGKLPPNQRMTWRSNSGLSDGSALNVDLVGGYYDAGDNMKFGFPMAFTTTMLSWSLIEFGGLMKSELPNAKDAIRWATDFLLK ATSHPDTIYVQVGDPNMDHACWERPEDMDTPRSVFKVDKNNPGSDIAGEIAAALAAASIVFRKCDPSYSNHLLQRAITVFTFADKYRGPYSAGLAPEVCP FYCSYSGYQDELLWGAAWLQKATNNPTYLNYIKANGQILGADEFDNMFSWDNKHVGARILLSKEFLIQKVKSLEEYKEHADSFICSVLPGASSSQYTPGG LLFKMGESNMQYVTSTSFLLLTYAKYLTSARTVAYCGGSVVTPARLRSIAKKQVDYLLGGNPLKMSYMVGYGLKYPRRIHHRGSSLPSVAVHPTRIQCHD GFSLFTSQSPNPNDLVGAVVGGPDQNDQFPDERSDYGRSEPATYINAPLVGALA |
Full Sequence |
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Protein Sequence Length: 502 Download |
MALYLSSSRL ITFLSFILLL SNGFSSSSSR PSIHHRHHLD NHNYKDALSK SILFFEGQRS 60 GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF GFPMAFTTTM LSWSLIEFGG 120 LMKSELPNAK DAIRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD 180 KNNPGSDIAG EIAAALAAAS IVFRKCDPSY SNHLLQRAIT VFTFADKYRG PYSAGLAPEV 240 CPFYCSYSGY QDELLWGAAW LQKATNNPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR 300 ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKMGES NMQYVTSTSF 360 LLLTYAKYLT SARTVAYCGG SVVTPARLRS IAKKQVDYLL GGNPLKMSYM VGYGLKYPRR 420 IHHRGSSLPS VAVHPTRIQC HDGFSLFTSQ SPNPNDLVGA VVGGPDQNDQ FPDERSDYGR 480 SEPATYINAP LVGALAYLAR S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02266 | PLN02266 | 0 | 40 | 501 | 464 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 41 | 499 | 461 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 43 | 496 | 461 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 0 | 40 | 499 | 465 | + cellulase | ||
PLN02613 | PLN02613 | 0 | 40 | 498 | 465 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0007389 | pattern specification process |
GO:0008810 | cellulase activity |
GO:0009624 | response to nematode |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC16418.1 | 0 | 1 | 501 | 1 | 501 | endo-1,4-beta glucanase [Arabidopsis thaliana] |
RefSeq | NP_171779.1 | 0 | 1 | 501 | 1 | 501 | ATCEL2; cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_192138.1 | 0 | 9 | 501 | 15 | 512 | AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002301487.1 | 0 | 10 | 501 | 13 | 507 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002320998.1 | 0 | 1 | 501 | 1 | 506 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 42 | 498 | 3 | 428 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 1ksc_A | 0 | 42 | 498 | 3 | 428 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 1ks8_A | 0 | 42 | 498 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 43 | 501 | 5 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 43 | 501 | 5 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |