| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G11580.1 |
| Family | CE8 |
| Protein Properties | Length: 558 Molecular Weight: 61687.4 Isoelectric Point: 9.077 |
| Chromosome | Chromosome/Scaffold: 1 Start: 3888690 End: 3890811 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 246 | 542 | 0 |
| NVVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNVIDGSTTFRSATVAANGDGFMAQDIWFQNTA GPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKIT ASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 558 Download |
| MSNSNQPLLS KPKSLKHKNL CLVLSFVAIL GSVAFFTAQL ISVNTNNNDD SLLTTSQICH 60 GAHDQDSCQA LLSEFTTLSL SKLNRLDLLH VFLKNSVWRL ESTMTMVSEA RIRSNGVRDK 120 AGFADCEEMM DVSKDRMMSS MEELRGGNYN LESYSNVHTW LSSVLTNYMT CLESISDVSV 180 NSKQIVKPQL EDLVSRARVA LAIFVSVLPA RDDLKMIISN RFPSWLTALD RKLLESSPKT 240 LKVTANVVVA KDGTGKFKTV NEAVAAAPEN SNTRYVIYVK KGVYKETIDI GKKKKNLMLV 300 GDGKDATIIT GSLNVIDGST TFRSATVAAN GDGFMAQDIW FQNTAGPAKH QAVALRVSAD 360 QTVINRCRID AYQDTLYTHT LRQFYRDSYI TGTVDFIFGN SAVVFQNCDI VARNPGAGQK 420 NMLTAQGRED QNQNTAISIQ KCKITASSDL APVKGSVKTF LGRPWKLYSR TVIMQSFIDN 480 HIDPAGWFPW DGEFALSTLY YGEYANTGPG ADTSKRVNWK GFKVIKDSKE AEQFTVAKLI 540 QGGLWLKPTG VTFQEWL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 3.0e-166 | 118 | 553 | 448 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 5.0e-167 | 93 | 553 | 474 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 0 | 1 | 557 | 558 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 246 | 542 | 297 | + Pectinesterase. | ||
| PLN02488 | PLN02488 | 0 | 58 | 557 | 510 | + probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0005886 | plasma membrane |
| GO:0009505 | plant-type cell wall |
| GO:0030599 | pectinesterase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAD29733.1 | 0 | 51 | 557 | 47 | 554 | pectin methylesterase [Sesbania rostrata] |
| RefSeq | NP_172624.1 | 0 | 1 | 557 | 1 | 557 | PMEPCRA (METHYLESTERASE PCR A); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
| Swiss-Prot | Q1JPL7 | 0 | 1 | 557 | 1 | 557 | PME18_ARATH RecName: Full=Pectinesterase/pectinesterase inhibitor 18; AltName: Full=AtPMEpcrA; Contains: RecName: Full=Pectinesterase inhibitor 18; AltName: Full=Pectin methylesterase inhibitor 18; Contains: RecName: Full=Bifunctional pectinesterase 18/rRNA N-glycosylase; Short=PE 18; AltName: Full=Ribosome-inactivating protein; AltName: Full=Pectin methylesterase 18; AltName: Full=Pectin methylesterase 4; Short=AtPME4; Flags: Precursor |
| RefSeq | XP_002317208.1 | 0 | 1 | 557 | 1 | 549 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518523.1 | 0 | 58 | 557 | 55 | 547 | Pectinesterase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 243 | 557 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 243 | 553 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 4e-25 | 243 | 545 | 2 | 337 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 4e-25 | 243 | 545 | 2 | 337 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 4e-25 | 243 | 545 | 2 | 337 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
