| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G13830.1 |
| Family | CBM43 |
| Protein Properties | Length: 198 Molecular Weight: 20381.8 Isoelectric Point: 5.4687 |
| Chromosome | Chromosome/Scaffold: 1 Start: 4739873 End: 4741038 |
| Description | X8 domain containing protein, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 22 | 99 | 9.9e-28 |
| CLCKDGIGDTELQTSIDYACGTLADCNPIHDKGTCYQPDTIKSHCDWAVNSYFQNAAQVPGSCNFSGTATTNPNPPSN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 198 Download |
| MKVLLGLLLL LSLTNSSSAI YCLCKDGIGD TELQTSIDYA CGTLADCNPI HDKGTCYQPD 60 TIKSHCDWAV NSYFQNAAQV PGSCNFSGTA TTNPNPPSNL ANGCIYPSSP SSTRSPPSTT 120 PPTGTTPTNG TTPFPGTPFP GTPFPGTPPV FGPTGVFNPS NPGSGASSLG TSSVFTLCFS 180 LLAFLWGSDV RFGFSHV* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 4.0e-16 | 21 | 91 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-27 | 21 | 106 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0008150 | biological_process |
| GO:0012505 | endomembrane system |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF79417.1 | 0 | 19 | 192 | 76 | 252 | AC068197_27 F16A14.5 [Arabidopsis thaliana] |
| GenBank | ACU19899.1 | 1.00053e-42 | 1 | 118 | 1 | 117 | unknown [Glycine max] |
| RefSeq | NP_172838.2 | 0 | 1 | 197 | 1 | 197 | beta-1,3-glucanase-related [Arabidopsis thaliana] |
| RefSeq | NP_671770.1 | 0 | 1 | 160 | 1 | 143 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
| RefSeq | XP_002311337.1 | 1.00053e-42 | 1 | 187 | 1 | 184 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.00000000000001 | 21 | 96 | 13 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
