| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G14430.1 |
| Family | AA5 |
| Protein Properties | Length: 565 Molecular Weight: 62765 Isoelectric Point: 8.9242 |
| Chromosome | Chromosome/Scaffold: 1 Start: 4934120 End: 4936100 |
| Description | glyoxal oxidase-related, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA5 | 40 | 564 | 0 |
| GGRWDLLQPSVGISAMHMQLLHNNKVVIFDRTDYGPSNVSLPSQTCQNATVFDCSAHSILYDVASNTFRPLTLRYDTWCSSGSLNASGSLIQTGGYGNGE RTVRVFTPCDGGVGSVSCDWIENRAYLSSRRWYSTNQILPDGRIIIVGGRRAFNYEFYPKDPGESVFNLRFLAETRDPNEENNLYPFLHLLPDGNLFIFA NRRSILFDFVNHRIIKEFPQIPGGDKRNYPSTGSSVLLPLFLTGDINRTKITAEVMVCGGAPPGAFFKAARTIPKIFVAGSRTCGRLKVTDPDPKWVMEQ MPSPRVMSDMLLLPNGDVLIINGAANGTAGWEDATNAVLNPILYLPEEPDQTRRFEILTPTRIPRMYHSASLLLSDGRVLVGGSNPHRNYNFTARPYPTE LSLEAYLPRYLDPQYARVRPTIITVELAGNMLYGQAFAVTFAIPAFGMFDGGVSVRLVAPSFSTHSTAMNQRLLVLRVRRVSQLSVFAYKADVDGPTNSY VAPPGYYMMFVVHRGIPSVAVWVKI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 565 Download |
| MTQERFKNNL NAVVISFFFF FLCSTSDLLL PRSPLAILTG GRWDLLQPSV GISAMHMQLL 60 HNNKVVIFDR TDYGPSNVSL PSQTCQNATV FDCSAHSILY DVASNTFRPL TLRYDTWCSS 120 GSLNASGSLI QTGGYGNGER TVRVFTPCDG GVGSVSCDWI ENRAYLSSRR WYSTNQILPD 180 GRIIIVGGRR AFNYEFYPKD PGESVFNLRF LAETRDPNEE NNLYPFLHLL PDGNLFIFAN 240 RRSILFDFVN HRIIKEFPQI PGGDKRNYPS TGSSVLLPLF LTGDINRTKI TAEVMVCGGA 300 PPGAFFKAAR TIPKIFVAGS RTCGRLKVTD PDPKWVMEQM PSPRVMSDML LLPNGDVLII 360 NGAANGTAGW EDATNAVLNP ILYLPEEPDQ TRRFEILTPT RIPRMYHSAS LLLSDGRVLV 420 GGSNPHRNYN FTARPYPTEL SLEAYLPRYL DPQYARVRPT IITVELAGNM LYGQAFAVTF 480 AIPAFGMFDG GVSVRLVAPS FSTHSTAMNQ RLLVLRVRRV SQLSVFAYKA DVDGPTNSYV 540 APPGYYMMFV VHRGIPSVAV WVKI* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam09118 | DUF1929 | 8.0e-23 | 458 | 564 | 108 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
| cd02851 | E_set_GO_C | 1.0e-25 | 454 | 564 | 112 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
| pfam07250 | Glyoxal_oxid_N | 1.0e-136 | 55 | 297 | 249 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0008150 | biological_process |
| GO:0012505 | endomembrane system |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF43943.1 | 0 | 1 | 564 | 1 | 564 | AC012188_20 Weak similarity to glyoxal oxidase (glx2) from Phanerochaete chrysosporium gb |
| RefSeq | NP_172895.1 | 0 | 1 | 561 | 1 | 561 | glyoxal oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269734.1 | 0 | 40 | 564 | 347 | 873 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312784.1 | 0 | 33 | 564 | 12 | 543 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520142.1 | 0 | 15 | 564 | 16 | 566 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2eic_A | 0.00000000000003 | 113 | 564 | 223 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 2wq8_A | 0.00000000000003 | 113 | 564 | 245 | 659 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
| PDB | 1t2x_A | 0.00000000000008 | 113 | 564 | 223 | 637 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
| PDB | 2vz3_A | 0.0000000000001 | 113 | 564 | 223 | 637 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
| PDB | 2vz1_A | 0.0000000000001 | 113 | 564 | 223 | 637 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
