| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G19710.1 |
| Family | GT4 |
| Protein Properties | Length: 480 Molecular Weight: 53738 Isoelectric Point: 10.2178 |
| Chromosome | Chromosome/Scaffold: 1 Start: 6814793 End: 6816876 |
| Description | glycosyl transferase, group 1 domain containing protein, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 270 | 438 | 9.1e-23 |
| NEDILFGIINSVSRGKGQDLFLRAFHESLKVIKETKKLEVPTMHAVVVGSDMSAQTKFETELRNFVQEMKLQKIVHFVNKTMKVAPYLAAIDVLVQNSQA RGECFGRITIEAMAFKLPVLGTAAGGTMEIVVNRTTGLLHNTGKDGVLPLAKNIVKLATNVKMRNTMGK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 480 Download |
| MAKPSTSMWA TLQKKRWPLM ILLVLSVSTV GMILVRSTFD SCSVSGKRCS REKEDNSDIK 60 IQSVSGSLNP LEFMKSKLVL LVSHELSLSG GPLLLMELAF LLRGVESEVV WITNQKPVEE 120 DEVIKVLEHK MLDRGVQVIS AKSQKAIDTA LKSDLVVLNT AVAGKWLDAV LKDNVPKVLP 180 KVLWWIHEMR GHYFKPDLVK HLPFVAGAMI DSHATAEYWK NRTHDRLGIK MPKTYVVHLG 240 NSKELMEVAE DSFAKNVLRE QVRESLGVRN EDILFGIINS VSRGKGQDLF LRAFHESLKV 300 IKETKKLEVP TMHAVVVGSD MSAQTKFETE LRNFVQEMKL QKIVHFVNKT MKVAPYLAAI 360 DVLVQNSQAR GECFGRITIE AMAFKLPVLG TAAGGTMEIV VNRTTGLLHN TGKDGVLPLA 420 KNIVKLATNV KMRNTMGKKG YERVKEMFLE HHMSHRIASV LREVLQHAKI HSRTTNSDH* 480 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0438 | RfaG | 4.0e-18 | 93 | 466 | 389 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| cd03819 | GT1_WavL_like | 7.0e-19 | 260 | 453 | 194 | + This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. | ||
| cd03798 | GT1_wlbH_like | 5.0e-19 | 206 | 464 | 262 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03808 | GT1_cap1E_like | 4.0e-21 | 226 | 453 | 229 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
| cd03801 | GT1_YqgM_like | 4.0e-30 | 99 | 462 | 378 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005794 | Golgi apparatus |
| GO:0009058 | biosynthetic process |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG12556.1 | 0 | 1 | 479 | 1 | 458 | AC007797_16 Unknown Protein [Arabidopsis thaliana] |
| EMBL | CBI19755.1 | 0 | 1 | 472 | 1 | 461 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_173401.1 | 0 | 1 | 479 | 1 | 479 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | NP_177675.1 | 0 | 10 | 469 | 5 | 458 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | XP_002281084.1 | 0 | 1 | 472 | 1 | 477 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jjm_L | 0.00000006 | 333 | 469 | 258 | 390 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_K | 0.00000006 | 333 | 469 | 258 | 390 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_J | 0.00000006 | 333 | 469 | 258 | 390 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_I | 0.00000006 | 333 | 469 | 258 | 390 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_H | 0.00000006 | 333 | 469 | 258 | 390 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
