| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G23200.1 |
| Family | CE8 |
| Protein Properties | Length: 555 Molecular Weight: 61270 Isoelectric Point: 9.4046 |
| Chromosome | Chromosome/Scaffold: 1 Start: 8227178 End: 8229582 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 251 | 539 | 0 |
| LVVAKDGSGHYTSIQQAVNAAAKLPRRNQRLVIYVKAGVYRENVVIKKSIKNVMVIGDGIDSTIVTGNRNVQDGTTTFRSATFAVSGNGFIAQGITFENT AGPEKHQAVALRSSSDFSVFYACSFKGYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTV ATASETYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 555 Download |
| MDHKILLTPP KSLYTKCIIT IIYVVSISHL NAHFITSCKQ TPYPSVCDHH MSNSPLKTLD 60 DQTDGFTFHD LVVSSTMDQA VQLHRLVSSL KQHHSLHKHA TSALFDCLEL YEDTIDQLNH 120 SRRSYGQYSS PHDRQTSLSA AIANQDTCRN GFRDFKLTSS YSKYFPVQFH RNLTKSISNS 180 LAVTKAAAEA EAVAEKYPST GFTKFSKQRS SAGGGSHRRL LLFSDEKFPS WFPLSDRKLL 240 EDSKTTAKAD LVVAKDGSGH YTSIQQAVNA AAKLPRRNQR LVIYVKAGVY RENVVIKKSI 300 KNVMVIGDGI DSTIVTGNRN VQDGTTTFRS ATFAVSGNGF IAQGITFENT AGPEKHQAVA 360 LRSSSDFSVF YACSFKGYQD TLYLHSSRQF LRNCNIYGTV DFIFGDATAI LQNCNIYARK 420 PMSGQKNTIT AQSRKEPDET TGFVIQSSTV ATASETYLGR PWRSHSRTVF MKCNLGALVS 480 PAGWLPWSGS FALSTLYYGE YGNTGAGASV SGRVKWPGYH VIKTVTEAEK FTVENFLDGN 540 YWITATGVPV NDGL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 3.0e-155 | 101 | 554 | 474 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 9.0e-156 | 3 | 554 | 584 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02916 | PLN02916 | 1.0e-156 | 103 | 554 | 468 | + pectinesterase family protein | ||
| PLN02713 | PLN02713 | 4.0e-160 | 36 | 554 | 540 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 250 | 540 | 300 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0012505 | endomembrane system |
| GO:0030599 | pectinesterase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN77092.1 | 0 | 24 | 554 | 15 | 507 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_173733.1 | 0 | 1 | 554 | 1 | 554 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002314796.1 | 0 | 21 | 554 | 16 | 531 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002318285.1 | 0 | 13 | 554 | 1 | 520 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527782.1 | 0 | 16 | 554 | 3 | 529 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 245 | 554 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 249 | 554 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 1e-19 | 252 | 511 | 7 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 1e-19 | 252 | 511 | 7 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 1e-19 | 252 | 511 | 7 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EC939603 | 286 | 279 | 555 | 0 |
| HO778758 | 469 | 103 | 554 | 0 |
| DY923593 | 279 | 259 | 531 | 0 |
| CD820002 | 215 | 219 | 433 | 0 |
| EE076581 | 280 | 248 | 518 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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