| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G24793.2 |
| Family | CE11 |
| Protein Properties | Length: 267 Molecular Weight: 29154.2 Isoelectric Point: 6.0456 |
| Chromosome | Chromosome/Scaffold: 1 Start: 8767564 End: 8769399 |
| Description | UDP-3-O- N-acetylglucosamine deacetylase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE11 | 39 | 260 | 0 |
| QQTLAGSVEVKGKSLHSGKFSTVKLNPEIAGAGRFFEFRSRFIPASIEFAQESPLCTTLLKDELKIRTVEHLLSALEAKGVDNCRIQIESESSDDREVEV PIFDGSAKEWVDAIQGVGINAAQNHDGESVEKMVAHVNKPVYVCKNDTFVAAFPALETRITCGIDFPQVPAIGCQWFSWRPIHESSFAKDIASSRTFCVY EEVERMREAGLIKGGSLDNAIV | |||
| Full Sequence |
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| Protein Sequence Length: 267 Download |
| MRLPVTVKAT KPSFLVIWIR YSSAASSPTV SLNPSGRLQQ TLAGSVEVKG KSLHSGKFST 60 VKLNPEIAGA GRFFEFRSRF IPASIEFAQE SPLCTTLLKD ELKIRTVEHL LSALEAKGVD 120 NCRIQIESES SDDREVEVPI FDGSAKEWVD AIQGVGINAA QNHDGESVEK MVAHVNKPVY 180 VCKNDTFVAA FPALETRITC GIDFPQVPAI GCQWFSWRPI HESSFAKDIA SSRTFCVYEE 240 VERMREAGLI KGGSLDNAIV SLSMDG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00325 | lpxC | 5.0e-49 | 39 | 260 | 227 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| PRK13188 | PRK13188 | 3.0e-50 | 39 | 260 | 230 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| pfam03331 | LpxC | 8.0e-61 | 39 | 260 | 227 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| COG0774 | LpxC | 7.0e-61 | 37 | 260 | 231 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| PRK13186 | lpxC | 5.0e-72 | 39 | 260 | 226 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD94001.1 | 0 | 1 | 266 | 1 | 266 | hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_001117351.1 | 0 | 1 | 266 | 1 | 266 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173874.2 | 0 | 1 | 266 | 1 | 266 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173884.5 | 0 | 1 | 266 | 44 | 309 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173888.1 | 0 | 1 | 266 | 239 | 504 | UDP-3-0-acyl N-acetylglucosamine deacetylase family protein / F-box protein-related [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4fw7_D | 5e-24 | 39 | 260 | 7 | 219 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 4fw7_C | 5e-24 | 39 | 260 | 7 | 219 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 4fw7_B | 5e-24 | 39 | 260 | 7 | 219 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 4fw7_A | 5e-24 | 39 | 260 | 7 | 219 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 4fw6_D | 5e-24 | 39 | 260 | 7 | 219 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| BX837978 | 120 | 7 | 126 | 0 |
| BX837978 | 122 | 145 | 266 | 0 |
| FY448967 | 243 | 3 | 240 | 0 |
| CF651953 | 126 | 1 | 126 | 0 |
| CF651953 | 92 | 145 | 236 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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