| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G25054.1 |
| Family | CE11 |
| Protein Properties | Length: 370 Molecular Weight: 40582.5 Isoelectric Point: 6.6442 |
| Chromosome | Chromosome/Scaffold: 1 Start: 8798483 End: 8806360 |
| Description | UDP-3-O- N-acetylglucosamine deacetylase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE11 | 82 | 366 | 0 |
| QQTLAGSVEVKGKSLHSGKFSTVKLNPEIAGAGRFFEFRSRFIPASIEFAQESPLCTTLLKDELKIRTVEHLLSALEAKGVDNCRIQIESESSDDREVEV PIFDGSAKEWVDAIQGVGINAAQNHDGESVEKMVAHVNKPVYVCKNDTFVAAFPALETRITCGIDFPQVPAIGCQWFSWRPIHESSFAKDIASSRTFCVY EEVERMREAGLIKGGSLDNAIVCSAEHGWMNPPLRFDDEACRHKILDLIGDLSLVSRGGNGGLPVAHIVAYKAGHALHTDLARHL | |||
| Full Sequence |
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| Protein Sequence Length: 370 Download |
| MLQIRIKKAK SAIRSHLFIG KDLALLLEII SDPAFYPIED VESMRLPVTV KATKPSFLVI 60 WIRYSSAASS PTVSLNPSGR LQQTLAGSVE VKGKSLHSGK FSTVKLNPEI AGAGRFFEFR 120 SRFIPASIEF AQESPLCTTL LKDELKIRTV EHLLSALEAK GVDNCRIQIE SESSDDREVE 180 VPIFDGSAKE WVDAIQGVGI NAAQNHDGES VEKMVAHVNK PVYVCKNDTF VAAFPALETR 240 ITCGIDFPQV PAIGCQWFSW RPIHESSFAK DIASSRTFCV YEEVERMREA GLIKGGSLDN 300 AIVCSAEHGW MNPPLRFDDE ACRHKILDLI GDLSLVSRGG NGGLPVAHIV AYKAGHALHT 360 DLARHLTMD* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 1.0e-66 | 82 | 366 | 318 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 7.0e-71 | 82 | 364 | 289 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam03331 | LpxC | 5.0e-84 | 82 | 364 | 289 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| COG0774 | LpxC | 7.0e-86 | 80 | 366 | 295 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| PRK13186 | lpxC | 5.0e-102 | 82 | 366 | 290 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG03128.1 | 0 | 40 | 353 | 235 | 542 | AC004133_22 F5A9.8 [Arabidopsis thaliana] |
| GenBank | AAG03130.1 | 0 | 40 | 353 | 235 | 548 | AC004133_24 F5A9.4 [Arabidopsis thaliana] |
| DDBJ | BAD94001.1 | 0 | 44 | 369 | 1 | 326 | hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_173874.2 | 0 | 44 | 369 | 1 | 326 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173884.5 | 0 | 1 | 369 | 1 | 369 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4fw7_D | 2e-37 | 82 | 369 | 7 | 280 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 4fw7_C | 2e-37 | 82 | 369 | 7 | 280 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 4fw7_B | 2e-37 | 82 | 369 | 7 | 280 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 4fw7_A | 2e-37 | 82 | 369 | 7 | 280 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 4fw6_D | 2e-37 | 82 | 369 | 7 | 280 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | UDPACYLGLCNACDEACETYL-RXN | EC-3.5.1.108 | UDP-3-O-acyl-N-acetylglucosamine deacetylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| BX837978 | 156 | 188 | 343 | 0 |
| BX837978 | 120 | 50 | 169 | 0 |
| FY448967 | 243 | 46 | 283 | 0 |
| CK277774 | 273 | 69 | 341 | 0 |
| CK277774 | 25 | 343 | 367 | 0.26 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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