y
Basic Information | |
---|---|
Species | Arabidopsis thaliana |
Cazyme ID | AT1G29380.1 |
Family | CBM43 |
Protein Properties | Length: 316 Molecular Weight: 30687.7 Isoelectric Point: 4.5543 |
Chromosome | Chromosome/Scaffold: 1 Start: 10284121 End: 10285970 |
Description | X8 domain containing protein, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 148 | 230 | 8.4e-34 |
WCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQKHPGSDSCNFGGAAQLTSTDPSKGSCH |
Full Sequence |
---|
Protein Sequence Length: 316 Download |
MTHRIAPRCF STIMLLCLLY TSPLDVIAQG QGGQGDIPVV NPTAPGGSTT TPTITQPSPP 60 SLTFPGPTTP TGGYPPLDGT TPTGGYPPLY GTTPPGGGDV GGGGGGYGGG TPGGGGGGGG 120 DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ 180 GAACYEPNTI RDHASFAFNS YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVST 240 SPPSQMSPPD FSSPPSSTYP PPITTPTTGI TGSGPPFGVA EPTGLPNSAT SVSHSLLSIF 300 TAVGILMPLL RENYL* 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-21 | 147 | 217 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-33 | 147 | 224 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0003674 | molecular_function |
GO:0008150 | biological_process |
GO:0012505 | endomembrane system |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG51737.1 | 0 | 1 | 228 | 1 | 228 | AC068667_16 beta-1,3 glucanase, putative; 26636-27432 [Arabidopsis thaliana] |
GenBank | ABK94231.1 | 0 | 3 | 315 | 38 | 304 | unknown [Populus trichocarpa] |
EMBL | CBI30817.1 | 1e-36 | 144 | 315 | 31 | 195 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_174231.2 | 0 | 1 | 315 | 1 | 315 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002519744.1 | 0 | 146 | 315 | 113 | 282 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-18 | 144 | 236 | 9 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |