y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT1G30000.1 |
Family | GH47 |
Protein Properties | Length: 625 Molecular Weight: 69069 Isoelectric Point: 7.1019 |
Chromosome | Chromosome/Scaffold: 1 Start: 10509211 End: 10512468 |
Description | glycosyl hydrolase family 47 domain contain protein, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 135 | 620 | 0 |
AFDHAWSGYRKYAMGYDELMPISQKGVDGLGGLGATVVDALDTAMIMGLDNIVSEAGSWVETHLLERISQKGQVNLFETTIRVLGGLLSAYHLSGGEQGT VNMTHVGPKPVIYLNIAKDLADRLLSAFTSSPTPVPFCDVILHESTAHPAPGGASSTAEVASVQLEFNYLSSISGDPKYSTEAMKVLAHIKTLPKTEGLV PIYISPQTGDFVGENIRLGSRGDSYYEYLIKVWLQQGAKLNSNFTYLHDMYIEAMKGVRHLLVQNSIPKGLVFVGELPYGSKGEFSPKMDHLVCFLPGTL ALGATKGLTKEQALKENLLSFEDLENLKLAEDLAKTCFEMYEVTATGLAPEIAYFHTKDYTEDGLDGGNKSSMYANDIIIKPADRHNLLRPETVESLFVL YRITKDTKYRDQGWQIFEAFEKYTKVKSGGYTSLDDVTEVPPHRRDKMETFFLGETLKYLYLLFGDDSVIPLDKFVFNTEAHPLPI |
Full Sequence |
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Protein Sequence Length: 625 Download |
MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC 60 LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR LSPDEGQLRG SSTNGSTISN 120 SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI 180 MGLDNIVSEA GSWVETHLLE RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV 240 GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE 300 FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY 360 EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS IPKGLVFVGE LPYGSKGEFS 420 PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT 480 GLAPEIAYFH TKDYTEDGLD GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD 540 TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD 600 DSVIPLDKFV FNTEAHPLPI RRNT* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 2.0e-172 | 128 | 620 | 498 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 0 | 135 | 620 | 489 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004559 | alpha-mannosidase activity |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0005794 | Golgi apparatus |
GO:0006487 | protein N-linked glycosylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52061.1 | 0 | 64 | 624 | 1 | 561 | AC022455_15 endoplasmic reticulum alpha-mannosidase, putative; 33510-31408 [Arabidopsis thaliana] |
RefSeq | NP_564345.1 | 0 | 1 | 624 | 1 | 624 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002275664.1 | 0 | 1 | 621 | 1 | 633 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
RefSeq | XP_002306001.1 | 0 | 1 | 621 | 1 | 629 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519694.1 | 0 | 1 | 621 | 1 | 620 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fmi_A | 0 | 128 | 620 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 128 | 620 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 128 | 620 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 128 | 620 | 88 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1dl2_A | 0 | 129 | 620 | 6 | 494 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |