| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G44980.1 |
| Family | CE8 |
| Protein Properties | Length: 247 Molecular Weight: 27742.8 Isoelectric Point: 5.6452 |
| Chromosome | Chromosome/Scaffold: 1 Start: 17004256 End: 17005923 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 77 | 243 | 0 |
| DILVAKDVTGNYNIVNVAIAAAPQHSQKRFVIYIKTSIYVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTT WPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQIVH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 247 Download |
| MAMIGVMEDS KLHEDMENDM LGDLTSRARE ALALFISISL RDNTELNLVV PNGPSWLSHV 60 DKKDLYLNDE TLKKITDILV AKDVTGNYNI VNVAIAAAPQ HSQKRFVIYI KTSIYVEIVV 120 IGNMKSNLTL IADGQDSTII TFNLSSSNSK RTFNTATFAS NGDGFIRVDM CFRNTTWPVK 180 GPVVTLRVNG DMSIIYRCRV EEYQDALYPH KNRQCYREYF LMDTVDFICG NAAAVFQFCQ 240 IVHMDG* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02488 | PLN02488 | 1.0e-6 | 1 | 22 | 22 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 1.0e-53 | 54 | 246 | 193 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 5.0e-66 | 16 | 242 | 227 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 3.0e-74 | 77 | 242 | 166 | + Pectinesterase. | ||
| PLN02488 | PLN02488 | 8.0e-127 | 21 | 242 | 222 | + probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF69174.1 | 0 | 1 | 246 | 1 | 221 | AC007915_26 F27F5.7 [Arabidopsis thaliana] |
| GenBank | ABK28620.1 | 0 | 21 | 242 | 159 | 380 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_175118.2 | 0 | 1 | 246 | 1 | 246 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_189437.1 | 0 | 1 | 242 | 66 | 353 | pectinesterase family protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 75 | 242 | 2 | 169 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 2e-40 | 77 | 241 | 8 | 172 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 0.0000001 | 88 | 245 | 44 | 221 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.001 | 94 | 242 | 24 | 191 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.001 | 94 | 242 | 24 | 191 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FY445789 | 223 | 21 | 242 | 0 |
| DN964103 | 213 | 21 | 232 | 0 |
| EY921135 | 188 | 55 | 242 | 0 |
| DV161515 | 222 | 20 | 241 | 0 |
| FG166454 | 222 | 20 | 241 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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