| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G53830.1 |
| Family | CE8 |
| Protein Properties | Length: 588 Molecular Weight: 64172.8 Isoelectric Point: 9.3289 |
| Chromosome | Chromosome/Scaffold: 1 Start: 20098522 End: 20100889 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 277 | 571 | 0 |
| ATVADDGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAG PSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGG TSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 588 Download |
| MAPIKEFISK FSDFKNNKKL ILSSAAIALL LLASIVGIAA TTTNQNKNQK ITTLSSTSHA 60 ILKSVCSSTL YPELCFSAVA ATGGKELTSQ KEVIEASLNL TTKAVKHNYF AVKKLIAKRK 120 GLTPREVTAL HDCLETIDET LDELHVAVED LHQYPKQKSL RKHADDLKTL ISSAITNQGT 180 CLDGFSYDDA DRKVRKALLK GQVHVEHMCS NALAMIKNMT ETDIANFELR DKSSTFTNNN 240 NRKLKEVTGD LDSDGWPKWL SVGDRRLLQG STIKADATVA DDGSGDFTTV AAAVAAAPEK 300 SNKRFVIHIK AGVYRENVEV TKKKTNIMFL GDGRGKTIIT GSRNVVDGST TFHSATVAAV 360 GERFLARDIT FQNTAGPSKH QAVALRVGSD FSAFYQCDMF AYQDTLYVHS NRQFFVKCHI 420 TGTVDFIFGN AAAVLQDCDI NARRPNSGQK NMVTAQGRSD PNQNTGIVIQ NCRIGGTSDL 480 LAVKGTFPTY LGRPWKEYSR TVIMQSDISD VIRPEGWHEW SGSFALDTLT YREYLNRGGG 540 AGTANRVKWK GYKVITSDTE AQPFTAGQFI GGGGWLASTG FPFSLSL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 8.0e-163 | 57 | 587 | 537 | + pectinesterase | ||
| PLN02484 | PLN02484 | 2.0e-175 | 58 | 583 | 530 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02313 | PLN02313 | 0 | 1 | 587 | 587 | + Pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 276 | 572 | 297 | + Pectinesterase. | ||
| PLN02301 | PLN02301 | 0 | 56 | 587 | 536 | + pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0030599 | pectinesterase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC50023.1 | 0 | 6 | 587 | 1 | 582 | ATPME2 precursor [Arabidopsis thaliana] |
| GenBank | AAC72288.1 | 0 | 53 | 587 | 50 | 592 | putative pectin methylesterase [Arabidopsis thaliana] |
| EMBL | CAB95025.1 | 0 | 42 | 587 | 42 | 579 | pectin methylesterase [Nicotiana tabacum] |
| RefSeq | NP_175786.1 | 0 | 1 | 587 | 1 | 587 | ATPME2; pectinesterase [Arabidopsis thaliana] |
| RefSeq | NP_188048.1 | 0 | 53 | 587 | 50 | 592 | ATPME3; pectinesterase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 269 | 587 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 273 | 583 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 4e-24 | 287 | 571 | 18 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 4e-24 | 287 | 571 | 18 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 6e-24 | 287 | 571 | 18 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
