| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G53840.1 |
| Family | CE8 |
| Protein Properties | Length: 587 Molecular Weight: 64149.2 Isoelectric Point: 8.5102 |
| Chromosome | Chromosome/Scaffold: 1 Start: 20101445 End: 20103667 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 280 | 571 | 0 |
| DVTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTA GAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTIS ANGNVIAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 587 Download |
| MDSVNSFKGY GKVDEAQDLA LKKKTRKRLL LLSISVVVLI AVIIAAVVAT VVHKNKNEST 60 PSPPPELTPS TSLKAICSVT RFPESCISSI SKLPSSNTTD PETLFKLSLK VIIDELDSIS 120 DLPEKLSKET EDERIKSALR VCGDLIEDAL DRLNDTVSAI DDEEKKKTLS SSKIEDLKTW 180 LSATVTDHET CFDSLDELKQ NKTEYANSTI TQNLKSAMSR STEFTSNSLA IVSKILSALS 240 DLGIPIHRRR RLMSHHHQQS VDFEKWARRR LLQTAGLKPD VTVAGDGTGD VLTVNEAVAK 300 VPKKSLKMFV IYVKSGTYVE NVVMDKSKWN VMIYGDGKGK TIISGSKNFV DGTPTYETAT 360 FAIQGKGFIM KDIGIINTAG AAKHQAVAFR SGSDFSVYYQ CSFDGFQDTL YPHSNRQFYR 420 DCDVTGTIDF IFGSAAVVFQ GCKIMPRQPL SNQFNTITAQ GKKDPNQSSG MSIQRCTISA 480 NGNVIAPTYL GRPWKEFSTT VIMETVIGAV VRPSGWMSWV SGVDPPASIV YGEYKNTGPG 540 SDVTQRVKWA GYKPVMSDAE AAKFTVATLL HGADWIPATG VINQLS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 1.0e-148 | 101 | 581 | 489 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 2.0e-152 | 138 | 581 | 469 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 2.0e-179 | 7 | 581 | 580 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 0 | 1 | 586 | 589 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 0 | 280 | 572 | 298 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005886 | plasma membrane |
| GO:0009505 | plant-type cell wall |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65650.1 | 0 | 1 | 586 | 1 | 586 | pectinesterase, putative [Arabidopsis thaliana] |
| RefSeq | NP_175787.1 | 0 | 1 | 586 | 1 | 586 | ATPME1; pectinesterase [Arabidopsis thaliana] |
| RefSeq | XP_002265217.1 | 0 | 1 | 581 | 1 | 572 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304256.1 | 0 | 1 | 584 | 1 | 585 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532945.1 | 0 | 1 | 581 | 1 | 583 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 280 | 581 | 4 | 309 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 273 | 579 | 1 | 311 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 3e-17 | 293 | 577 | 20 | 339 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 3e-17 | 293 | 577 | 20 | 339 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 3e-17 | 293 | 577 | 20 | 339 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
