| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G67290.1 |
| Family | AA5 |
| Protein Properties | Length: 616 Molecular Weight: 67775.1 Isoelectric Point: 9.2936 |
| Chromosome | Chromosome/Scaffold: 1 Start: 25191021 End: 25193237 |
| Description | glyoxal oxidase-related, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA5 | 3 | 614 | 0 |
| KSTRLLWLLSIIVLVAAVSKAVAEVDNDDDDDNTSLEGMTTAKRETLEVEDHTSLEGMVKREALEVKPPKAGKGKGKGKGRGTVAAGPEMNWPGQWELFM KNSGVSAMHAILMPLINKVQFYDATIWRISQIKLPPGVPCHVFDAKKNKVDCWAHSVLVDINTGDIKPLALTTDTWCSSGGLTVNGTLVSTGGFQGGANT ARYLSTCENCVWIEYPKALAARRWYSTQATLPDGTFIVVGGRDALNYEYILPEGQNNKKLYDSQLLRQTDDPEENNLYPFVWLNTDGNLFIFANNRSILL SPKTNKVLKEFPQLPGGARNYPGSASSALLPIRLYVQNPAIIPADVLVCGGAKQDAYFRAERLKIYDWALKDCARLNINSAKPVWKTETMPTSRVMSDTV ILPNGEILIINGAKRGSSGWHLAKEPNFAPLLYKPNKPLGQRFKELAPSTIPRVYHSIAIALPDGKVLVGGSNTNNGYQFNVEYPTELRIEKFSPPYLDP ALANMRPRIVNTATPKQIKYGQMFDVKIELKQQNVAKENVMVTMLAPSFTTHSVSMNMRLLMLGINNVKNVGGDNHQIQAVAPPSGKLAPPGYYLLFAVY NGVPSVGEWIQI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 616 Download |
| MKKSTRLLWL LSIIVLVAAV SKAVAEVDND DDDDNTSLEG MTTAKRETLE VEDHTSLEGM 60 VKREALEVKP PKAGKGKGKG KGRGTVAAGP EMNWPGQWEL FMKNSGVSAM HAILMPLINK 120 VQFYDATIWR ISQIKLPPGV PCHVFDAKKN KVDCWAHSVL VDINTGDIKP LALTTDTWCS 180 SGGLTVNGTL VSTGGFQGGA NTARYLSTCE NCVWIEYPKA LAARRWYSTQ ATLPDGTFIV 240 VGGRDALNYE YILPEGQNNK KLYDSQLLRQ TDDPEENNLY PFVWLNTDGN LFIFANNRSI 300 LLSPKTNKVL KEFPQLPGGA RNYPGSASSA LLPIRLYVQN PAIIPADVLV CGGAKQDAYF 360 RAERLKIYDW ALKDCARLNI NSAKPVWKTE TMPTSRVMSD TVILPNGEIL IINGAKRGSS 420 GWHLAKEPNF APLLYKPNKP LGQRFKELAP STIPRVYHSI AIALPDGKVL VGGSNTNNGY 480 QFNVEYPTEL RIEKFSPPYL DPALANMRPR IVNTATPKQI KYGQMFDVKI ELKQQNVAKE 540 NVMVTMLAPS FTTHSVSMNM RLLMLGINNV KNVGGDNHQI QAVAPPSGKL APPGYYLLFA 600 VYNGVPSVGE WIQIV* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam09118 | DUF1929 | 4.0e-28 | 508 | 614 | 108 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
| cd02851 | E_set_GO_C | 2.0e-29 | 508 | 614 | 108 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
| pfam07250 | Glyoxal_oxid_N | 9.0e-121 | 110 | 353 | 249 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0008150 | biological_process |
| GO:0012505 | endomembrane system |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL84955.1 | 0 | 1 | 615 | 1 | 594 | AT5g19580/T20D1_100 [Arabidopsis thaliana] |
| RefSeq | NP_176897.1 | 0 | 1 | 615 | 1 | 615 | glyoxal oxidase-related [Arabidopsis thaliana] |
| RefSeq | NP_197459.1 | 0 | 1 | 615 | 1 | 594 | glyoxal oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002331167.1 | 0 | 96 | 614 | 89 | 608 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514260.1 | 0 | 91 | 614 | 91 | 612 | Galactose oxidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2eid_A | 3e-20 | 162 | 615 | 208 | 638 | A Chain A, Galactose Oxidase W290g Mutant |
| PDB | 2eib_A | 3e-20 | 162 | 615 | 208 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 2eic_A | 5e-20 | 162 | 615 | 208 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 2vz3_A | 6e-20 | 162 | 615 | 208 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 2vz1_A | 6e-20 | 162 | 615 | 208 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
