| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G69295.1 |
| Family | CBM43 |
| Protein Properties | Length: 223 Molecular Weight: 22076.4 Isoelectric Point: 5.7102 |
| Chromosome | Chromosome/Scaffold: 1 Start: 26050197 End: 26052567 |
| Description | glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 22 | 102 | 3.4e-27 |
| CLCKEGNEQVLQKAIDYACGNGADCTQIQPTGACYQPNTVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 223 Download |
| MSVLLPLCLI ISMFTYSNAA YCLCKEGNEQ VLQKAIDYAC GNGADCTQIQ PTGACYQPNT 60 VKNHCDVAVN SYYQKKASSG ATCDFNGAAS PSTTPPSTAS NCLTGSSSSG TPTTGTPTTG 120 TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF 180 PGTTLGPTGS GGLGDPNAGE KLSVRTNTVV FLLTGVAAML VI* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 8.0e-16 | 21 | 87 | 73 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-26 | 21 | 87 | 68 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005886 | plasma membrane |
| GO:0008150 | biological_process |
| GO:0009506 | plasmodesma |
| GO:0030247 | polysaccharide binding |
| GO:0031225 | anchored to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52501.1 | 0 | 1 | 205 | 1 | 205 | AC018364_19 unknown protein; 45065-49536 [Arabidopsis thaliana] |
| GenBank | AAM62861.1 | 0 | 1 | 222 | 1 | 222 | unknown [Arabidopsis thaliana] |
| DDBJ | BAD43464.1 | 0 | 1 | 191 | 1 | 191 | predicted GPI-anchored protein [Arabidopsis thaliana] |
| RefSeq | NP_173968.1 | 0 | 1 | 205 | 1 | 180 | beta-1,3-glucanase-related [Arabidopsis thaliana] |
| RefSeq | NP_564957.1 | 0 | 1 | 222 | 1 | 222 | PDCB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4); callose binding / polysaccharide binding [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.0000000000003 | 20 | 97 | 12 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
