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Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT1G78060.1 |
Family | GH3 |
Protein Properties | Length: 768 Molecular Weight: 83891.8 Isoelectric Point: 8.1186 |
Chromosome | Chromosome/Scaffold: 1 Start: 29349679 End: 29352924 |
Description | glycosyl hydrolase family 3 protein, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 72 | 325 | 0 |
IPRLGVPAYEWWSEALHGVAYAGPGIRFNGTVKAATSFPQVILTAASFDSYEWFRIAQVIGKEARGVYNAGQANGMTFWAPNINIFRDPRWGRGQETPGE DPMMTGTYAVAYVRGLQGDSFDGRKTLSNHLQASACCKHFTAYDLDRWKGITRYVFNAQVSLADLAETYQPPFKKCIEEGRASGIMCAYNRVNGIPSCAD PNLLTRTARGQWAFRGYITSDCDAVSIIYDAQGYAKSPEDAVADVLKAGMDVNC |
Full Sequence |
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Protein Sequence Length: 768 Download |
MAKQLLLLLL LFIVHGVESA PPPHSCDPSN PTTKLYQFCR TDLPIGKRAR DLVSRLTIDE 60 KISQLVNTAP GIPRLGVPAY EWWSEALHGV AYAGPGIRFN GTVKAATSFP QVILTAASFD 120 SYEWFRIAQV IGKEARGVYN AGQANGMTFW APNINIFRDP RWGRGQETPG EDPMMTGTYA 180 VAYVRGLQGD SFDGRKTLSN HLQASACCKH FTAYDLDRWK GITRYVFNAQ VSLADLAETY 240 QPPFKKCIEE GRASGIMCAY NRVNGIPSCA DPNLLTRTAR GQWAFRGYIT SDCDAVSIIY 300 DAQGYAKSPE DAVADVLKAG MDVNCGSYLQ KHTKSALQQK KVSETDIDRA LLNLFSVRIR 360 LGLFNGDPTK LPYGNISPNE VCSPAHQALA LDAARNGIVL LKNNLKLLPF SKRSVSSLAV 420 IGPNAHVVKT LLGNYAGPPC KTVTPLDALR SYVKNAVYHQ GCDSVACSNA AIDQAVAIAK 480 NADHVVLIMG LDQTQEKEDF DRVDLSLPGK QQELITSVAN AAKKPVVLVL ICGGPVDISF 540 AANNNKIGSI IWAGYPGEAG GIAISEIIFG DHNPGGRLPV TWYPQSFVNI QMTDMRMRSA 600 TGYPGRTYKF YKGPKVYEFG HGLSYSAYSY RFKTLAETNL YLNQSKAQTN SDSVRYTLVS 660 EMGKEGCDVA KTKVTVEVEN QGEMAGKHPV LMFARHERGG EDGKRAEKQL VGFKSIVLSN 720 GEKAEMEFEI GLCEHLSRAN EFGVMVLEEG KYFLTVGDSE LPLIVNV* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 3.0e-55 | 69 | 427 | 367 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-55 | 398 | 626 | 236 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 4.0e-56 | 57 | 350 | 323 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-74 | 51 | 746 | 783 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 16 | 767 | 767 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005618 | cell wall |
GO:0005975 | carbohydrate metabolic process |
GO:0009505 | plant-type cell wall |
GO:0009507 | chloroplast |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_177929.1 | 0 | 1 | 767 | 1 | 767 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002285805.1 | 0 | 5 | 767 | 6 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302285.1 | 0 | 17 | 765 | 21 | 771 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 9 | 767 | 13 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 6 | 767 | 11 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 107 | 757 | 91 | 722 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3u48_A | 0 | 107 | 757 | 91 | 722 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3u4a_B | 0 | 107 | 757 | 91 | 722 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3u4a_A | 0 | 107 | 757 | 91 | 722 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 4i3g_B | 2e-38 | 48 | 451 | 53 | 428 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |