| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT1G79480.1 |
| Family | CBM43 |
| Protein Properties | Length: 398 Molecular Weight: 41777.5 Isoelectric Point: 4.6786 |
| Chromosome | Chromosome/Scaffold: 1 Start: 29897727 End: 29899604 |
| Description | glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 311 | 392 | 1.2e-31 |
| WCVAKPSVPDPIIQEAMNFACGSGADCHSIQPNGPCFKPNTLWAHASFAYNSYWQRTKSTGGSCTFGGTGMLVTVDPSFNGC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 398 Download |
| MESYRVFTTI CLLLCLFLSA NFFTHYVVDA RKSVGFEREP KKVMMIKALK HTSLLQKMMT 60 QLNLAQPLDY SSSSNTQPYG VSTTLTLPPY VSLPPLSVPG NAPPFCINPP NTPPSSSYPG 120 LSPPPGPITL PNPPDSSSNP NSNPNPPESS SNPNPPDSSS NPNSNPNPPV TVPNPPESSS 180 NPNPPDSSSN PNSNPNPPES SSNPNPPVTV PNPPESSSNP NPPESSSNPN PPITIPYPPE 240 SSSPNPPEIV PSPPESGYTP GPVLGPPYSE PGPSTPTGSI PSPSSGFLPP IVYPPPMAPP 300 SPSVTPTSAY WCVAKPSVPD PIIQEAMNFA CGSGADCHSI QPNGPCFKPN TLWAHASFAY 360 NSYWQRTKST GGSCTFGGTG MLVTVDPSFN GCHFDFF* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-16 | 311 | 366 | 61 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-30 | 311 | 394 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0012505 | endomembrane system |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD30228.1 | 0 | 45 | 388 | 1 | 344 | AC007202_10 T8K14.10 [Arabidopsis thaliana] |
| RefSeq | NP_001117621.1 | 0 | 1 | 397 | 1 | 396 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_178066.2 | 0 | 1 | 397 | 1 | 397 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002264966.1 | 0 | 12 | 397 | 8 | 368 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312230.1 | 0 | 73 | 388 | 3 | 292 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 3e-17 | 311 | 394 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
