| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT2G14690.1 |
| Family | GH10 |
| Protein Properties | Length: 571 Molecular Weight: 64944.3 Isoelectric Point: 6.5233 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6283801 End: 6286055 |
| Description | glycosyl hydrolase family 10 protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 205 | 465 | 0 |
| KPSFLLGCAMNYRILESDSYREWFVSRFRLTSFTNEMKWYATEAVRGQENYKIADSMMQLAEENAILVKGHTVLWDDKYWQPNWVKTITDPEDLKNVTLN RMNSVMKRYKGRLIGWDVMNENVHFNYFENMLGGNASAIVYSLASKLDPDIPLFLNEFNTVEYDKDRVVSPVNVVKKMQEIVSFPGNNNIKGGIGAQGHF APVQPNLAYMRYALDTLGSLSFPVWLTEVDMFKCPDQVKYMEDILREAYSHPAVKAIILYG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 571 Download |
| MKRFNYGFFH LVLFLISLLL LGSGICMDPF SYDQSLKSEC LMEPPQTTAN TGGEGVKELK 60 INENGGIRNV VEGVDLREGN IYITSAWVKL RNESQRKVGM TFSEKNGRNV FGGEVMAKRG 120 CWSLLKGGIT ADFSGPIDIF FESDGLAGLE ISVQNVRMQR FHKTQWRLQQ DQVIEKIRKN 180 KVRFQMSFKN KSALEGSVIS IEQIKPSFLL GCAMNYRILE SDSYREWFVS RFRLTSFTNE 240 MKWYATEAVR GQENYKIADS MMQLAEENAI LVKGHTVLWD DKYWQPNWVK TITDPEDLKN 300 VTLNRMNSVM KRYKGRLIGW DVMNENVHFN YFENMLGGNA SAIVYSLASK LDPDIPLFLN 360 EFNTVEYDKD RVVSPVNVVK KMQEIVSFPG NNNIKGGIGA QGHFAPVQPN LAYMRYALDT 420 LGSLSFPVWL TEVDMFKCPD QVKYMEDILR EAYSHPAVKA IILYGGPEVS GFDKLTLADK 480 DFKNTQAGDL IDKLLQEWKQ EPVEIPIQHH EHNDEEGGRI IGFSPEISLL HGHYRVTVTN 540 PSMKNLSTRF SVEVTKESGH LQEVQLVIDA * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 3.0e-30 | 239 | 465 | 246 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 3.0e-44 | 202 | 465 | 284 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-76 | 241 | 491 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0012505 | endomembrane system |
| GO:0031176 | endo-1,4-beta-xylanase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC69373.1 | 0 | 42 | 570 | 1 | 552 | 1,4-beta-xylan endohydrolase [Arabidopsis thaliana] |
| GenBank | AAQ65190.1 | 0 | 42 | 570 | 1 | 529 | At2g14690 [Arabidopsis thaliana] |
| RefSeq | NP_179076.3 | 0 | 1 | 570 | 1 | 570 | endo-1,4-beta-xylanase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_195107.1 | 0 | 42 | 570 | 1 | 536 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | NP_680761.1 | 0 | 1 | 570 | 1 | 570 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1i1x_A | 1e-25 | 197 | 435 | 5 | 240 | A Chain A, Crystal Structure Of The Human Hip Ectodomain |
| PDB | 1i1w_A | 1e-25 | 197 | 435 | 5 | 240 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 2e-25 | 197 | 435 | 5 | 240 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1tux_A | 5e-25 | 239 | 435 | 47 | 240 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1k6a_A | 6e-25 | 197 | 435 | 5 | 240 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-beta-xylanase |
