| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT2G16230.1 |
| Family | CBM43 |
| Protein Properties | Length: 504 Molecular Weight: 54146.6 Isoelectric Point: 4.5644 |
| Chromosome | Chromosome/Scaffold: 2 Start: 7035463 End: 7038326 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 366 | 447 | 6e-32 |
| WCVPKEDATQEQLQDSLDWVCGQGIDCGPIMPGGVCFEPNNVASHTAYAMNLYFQKSPENPTDCDFSKTARITSENPSYSSC | |||
| GH17 | 25 | 342 | 0 |
| IGVNYGLLSDNLPPPSQTAKLLQSTSIQKVRLYNADSSIITSLVGTGIGIVIGVANGDLPSIASDLNIASQWINSNVLPFYPASNIILINVGNEVLLSND LNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVHAMTVLGNSEPPSAGSFAPSYQAGLKGILQFLSDTGSPFAINPYPFFAYQSDPRPETLAFCLFQPNPG RVDSNTGIKYMNMFDAQVDAVHSALKSIGFEKVEVLVAETGWPSTGDSNEVGPSVENAKAYNGNLIAHLRSMVGTPLMPGKSIDTYIFALFDENLKPGPS FEQSFGLFKPDLSMAYDI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 504 Download |
| MALSILFLLL FILFSISPSN AQSFIGVNYG LLSDNLPPPS QTAKLLQSTS IQKVRLYNAD 60 SSIITSLVGT GIGIVIGVAN GDLPSIASDL NIASQWINSN VLPFYPASNI ILINVGNEVL 120 LSNDLNLVNQ LLPAMQNVQK ALEAVSLGGK IKVSTVHAMT VLGNSEPPSA GSFAPSYQAG 180 LKGILQFLSD TGSPFAINPY PFFAYQSDPR PETLAFCLFQ PNPGRVDSNT GIKYMNMFDA 240 QVDAVHSALK SIGFEKVEVL VAETGWPSTG DSNEVGPSVE NAKAYNGNLI AHLRSMVGTP 300 LMPGKSIDTY IFALFDENLK PGPSFEQSFG LFKPDLSMAY DIGLTKTTSS QTSQSPQLGK 360 VTSMGWCVPK EDATQEQLQD SLDWVCGQGI DCGPIMPGGV CFEPNNVASH TAYAMNLYFQ 420 KSPENPTDCD FSKTARITSE NPSYSSCVYP RAGDGSITGE VTKYVTSDKA TEKNGSECFS 480 SLYLARFIIS IYFFCLFPSL RIM* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-11 | 84 | 335 | 256 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-20 | 366 | 435 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-39 | 366 | 449 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-94 | 25 | 342 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0012505 | endomembrane system |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD22313.1 | 0 | 1 | 443 | 1 | 443 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
| GenBank | ABK95837.1 | 0 | 1 | 450 | 1 | 448 | unknown [Populus trichocarpa] |
| RefSeq | NP_179219.4 | 0 | 1 | 503 | 1 | 503 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_195174.6 | 0 | 1 | 476 | 1 | 480 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002509479.1 | 0 | 19 | 450 | 22 | 456 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 25 | 342 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 25 | 342 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 25 | 342 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 25 | 345 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 25 | 345 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
